6 homologs were found in PanDaTox collection
for query gene Cpin_2307 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_2307  PKD domain containing protein  100 
 
 
356 aa  737    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.625319 
 
 
-
 
NC_009441  Fjoh_3280  PKD domain-containing protein  28.13 
 
 
350 aa  128  2.0000000000000002e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0424  PKD  31.48 
 
 
1292 aa  47.4  0.0004  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.854916 
 
 
-
 
NC_013202  Hmuk_2921  PKD domain containing protein  25.28 
 
 
623 aa  46.6  0.0007  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009939  Dgeo_3026  PKD domain-containing protein  25.44 
 
 
552 aa  43.5  0.005  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1505  Glycoside hydrolase, family 20, catalytic core  24.68 
 
 
816 aa  42.7  0.009  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.869244  normal 
 
 
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