| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0424 |
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| Symbol | |
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| ID | 3923987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 484665 |
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| End bp | 488543 |
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| Gene Length | 3879 bp |
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| Protein Length | 1292 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637896065 |
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| Product | PKD |
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| Protein accession | YP_501907 |
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| Protein GI | 88601729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.854916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAGA AAATGAACAG ATATCTACTA ATGGCGACAT GCATCGTCCT GATGACATGC
GTTGCGATAG TATCTGCTGA ATCCTTTGAT AATATTGATC AAAATCTGAT TATCAAACAG
ATCCGGCAAA ACCATACTGT CTACTTTGGT GAGGAACACC TGGATATCAC CAATTGTCTG
GGTGGAAACG GGTATATTGT AACGTTGGAT GTGGTCAGAA ATGTGACAGA TCACATAAAA
ATAAATGATC CGACTGACTT CAATATGCCC ACGGATAAAG AAGAGAACGT CTGGTACCAG
GCACGAGATG CGAAAACACC GGTATTAGAT CCGCAGGGAA ATCCGGTCCC GGCATTCATT
ACTCAGGAAC CGGTTCTTTC ATTCGATATC TGGAATCTGA ATACTGACAT GAAAGCGAAC
GCTTCGGTCC AGAGGGGTAC GCTTCTTCAG TTCAAGATGA CCACCGATAC GAACCTCGAT
GACATAACCA GTCGTCTTGA TTACACTCCC GGTCAGGGAT ATGTAAATAT CGGTGTACGA
GCACCTAATG AAACCAATCC AAAAGATCCA ACTGGGGAAA CTCTTTTAAA ATTAATGACG
CTCGGGAAAA ACTCCGGTGA TGTTGAGATT AAACCGACAA TTAATCTGGA AGTTGATCCA
TCAGCAGCAT GGGTATGGCC TGAAAACCTG AACTCTGAAA CCGCAGATCC AACCGGGTGG
ATGACCGGAT GGCGTGATGC AGGAACTGGT GTTGAGACTG ATTACAACTA CAAGCTGGGA
ACCTATGATG TGACCGCTGT CTGTAATGTC AACAACATGT TCAAGAACCG TCAGCGTCAG
GGCTTTACCT GGGATTCACA GAAAGTGGAA CTGACAGCAC GTGAGATCAA GGTTGATGTA
TCTGCACCGG TCGGAAAGAG CAGAGATGTC CAGTTTACCG CAACGGTAAC CGGTATGCCA
AATACGCTCT ATGAGATCTT CATTTATGAT GAGTGTCCGC CGAAAATCAG CGGAAAGATC
TGTGACCGGC CACCGTTTAT TAGGGAAGAC CGAGCAGCTC TCATGGGGAA AGGCATCGAA
CTTGATCCGA TTGACGGACC ATATCCGATT GGAACACGGC TTGTTGTGGA TTGCTGTACC
CAGGGTATGA ACATCCGTCA GGCTGTACCG TCAGGAGATG CATTCCCGTC ACAGGGTAAG
AATGTCTTTG AGAAAGGTAC TCGCTATTAT GCACAGGTCA GAACCGGACC TGATGGAAAG
GTTACTGTTC CATTCTGGAT TGATACCACA GTCGGTCCTG GCACCTACAC GATTCAGGCA
CAGGATATCC TGTATAACCT GAAGTCAACT GCCACCATTA CTGTTCCTCA GGGGACTATT
ACCGGTGCAA CAAAGGATCC GGCCGGCGTT GCCAAGACCG AGTTCTACCT GGGTGATGAG
ATATGGATCG ATGGTACAAA CTCTGACAGC AACATGACCT ACATCTGGCT GACCGGTCCA
GGTCTGAACC CCTGTGGTGT CAACCTCTTC AGCCCGCTTG ACAGCAATGA TCCGGTCAGA
GCAGTTGTCT ATGACACCAA GGATGGAATT GCCAACTACT GGCGTGTGGA ACCAAACTGG
GACACGGGGG CTGTCCCGAT TAGTGAAGGC AAGTATACCA TCTGGATGGC AAGTGTTGAT
CCAGGATGCC GGTTCTGTCA GTGTGATGCT GCCGGAGGCG GAGAATGTGG ATTTGGTGAC
TGTTTCGGAG TAGCATGTGA GGAAGGAGTA TGCAGCCTTC TCAATTGTCC GGAATGCGCA
GCAGTATCCA GCATTGATGT TACACTCATC AAGCCTGACA TAACCGCTGA GGTGGATGAT
GTAACCCGCT GTTGTTGTCC TGGCTACCCC TGTGGTCAGC TGGGTGGAGT CCAGGAGATC
TGGATTGAAG GAAGCTCAGG CGGTAACTCC TGCAAGCAGC TTCAGGTCTG GCTCTTTGGC
CAGAGTCAGT TCGGTCTTAA GAATTATCTG ATGACAGTAA CTCCCATTTA CTGCGATGGC
ACATACAAGT TCGAACTCAA TAAGGGACTT CTGCAGGCAA ATGGCATTGA CCTCTGCAGC
ATAGCAACCG GTAAATATGA TGTGATTGTC CAGGCACCCG GAGCGAACAA TAACTTTGAT
ATTCGCCTTG GAGAACCTGA AAACACGGGA GACCGGTTTG TCCTGACAAC CATGCCAACT
GATGACAGCA AATTATTCAA GATAGAGGGC AAGGATTCCC TGTATGCAGG AGTTGCAGTC
AAAGCTCTGA TTGATGGGTT TAACCAGGAT GGCATTGATG ACCTGTATGC TCATGTGACC
TTTGAGCTGA AAGACAAGGC CTGTGAAGGC AATGTTGATT TCACAGCCGA TAAGACACAG
GGCAATGCTC CTCTATCAGT GCAGTTCACT GACACGTCTG TTATGCAGGG TGTCAGCTGG
GCATGGACTG CAAATGGTGA GGCATTCTCA ACTGAGCAGA ACCCGAAGAA GGTCTTTGAC
AAAACCGGGA AGTATACGAT TGAACTGACC GTAACCGATG CAGAGGGAGT CAGCAACACC
GCAACCAAGG ATAGTTATAT TAATGTAATA TCCGGTCCGG TTGCAGACTT CAGCTTCAAT
CCTGCGTCAC CAGTTACCGG AGAGACGGTT CAGTTCATTG ATGAATCTTT GGGATCTCCG
GCATCCTGGC AGTGGAGCTT TGGTGATGCA ACCTCTTCAT CAGTGCAAAG TCCTGCTCAT
GTCTATTACC TGCCAGGGAC CTATAATGTG ACCCTGACCG TGAGTGACAA GTACGGTGAC
TCGAGTATAT CCAAATCGGT AACCGTCACT GGTAATCCGA TCTCCACCGG TTTAGTTGCT
GATTTCACCA TGGCTCCGGC ATCTGCCTAT GCAGGTGACC AGATTCAGTT CACCGATAAG
TCAACCGGTG GAACACCGAC ATCCTGGCAA TGGGAGTTCG GCGATAATAC AACCTCGTCA
CTTCAGAGCC CGGTACACAT CTATGAAAAA CCAGGTACAT ACCAGGTTAT TCTGAATGTA
GGAGACAGCC GGGGAGTTGG CGTTCCAAAG ATCGTTGATT ACCTGGTTAT GAACGATGCA
CCGGTTGCAG CATTCTCTGC AGATCCGTTA TCATCCGAAT TCTACCCGGT TCAGGTGGAG
TTCACTGATG AATCAACCGG TGTTGTTGAT GAATGGAACT GGCAGATTCT GCGTGAAGGA
AAGGTAGTTG CAACATCAGT TGAACAGAAT CCGACGATTA CATTTACTGT TCCGGGTATC
TACACGGTAA CCCTGACGGT GAAGAATAAT GGTGGTTCCA ACTCCGTCAC AAAAGACAAT
TATATTACAA TCGGAACCGG CAGTCAGTTT ACGATTGAAC AGGGATGGAA CCATGTGTCA
GTCCCCATGG CTGTAACAGA TGACTACAAC ACCGTCAGCA AACTGTTTAA GGGTATCCAG
ACCGGAGGAG TTCCTTATGC AGTCTTCAAT AATGCTGCAA ATGAATGGGT GAATGTGACT
GATGATTATC CGGTTAAGCC ACTTGAAGCG CTCAGAGTAT GGAAGGAGGA TCCAGGATCA
ATCGTGATAA CTCCGGATTA CACAAAGGGA GGTATCTTTA CCCGTGATCT GAAGCTAGGC
TGGAACGGTA TCGGAATCAT GTTCATGCAG CCAACTCCTG CTAATGTAGC CCTTGCCTCA
CTGGGAGAAG CCTGGAACAA GACGCTCATG TTCAATCCGT TAACCCAGCG GTGGGAGTAT
CCGATTATCA GGGGAGTGGA TGATGACAAA TTCATGTATC CAACAGTCGG CTATCTCATC
GAGATGAACA CTGACGGGAT ACTGATTGGT GGTGAGTAA
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| Protein sequence | MREKMNRYLL MATCIVLMTC VAIVSAESFD NIDQNLIIKQ IRQNHTVYFG EEHLDITNCL
GGNGYIVTLD VVRNVTDHIK INDPTDFNMP TDKEENVWYQ ARDAKTPVLD PQGNPVPAFI
TQEPVLSFDI WNLNTDMKAN ASVQRGTLLQ FKMTTDTNLD DITSRLDYTP GQGYVNIGVR
APNETNPKDP TGETLLKLMT LGKNSGDVEI KPTINLEVDP SAAWVWPENL NSETADPTGW
MTGWRDAGTG VETDYNYKLG TYDVTAVCNV NNMFKNRQRQ GFTWDSQKVE LTAREIKVDV
SAPVGKSRDV QFTATVTGMP NTLYEIFIYD ECPPKISGKI CDRPPFIRED RAALMGKGIE
LDPIDGPYPI GTRLVVDCCT QGMNIRQAVP SGDAFPSQGK NVFEKGTRYY AQVRTGPDGK
VTVPFWIDTT VGPGTYTIQA QDILYNLKST ATITVPQGTI TGATKDPAGV AKTEFYLGDE
IWIDGTNSDS NMTYIWLTGP GLNPCGVNLF SPLDSNDPVR AVVYDTKDGI ANYWRVEPNW
DTGAVPISEG KYTIWMASVD PGCRFCQCDA AGGGECGFGD CFGVACEEGV CSLLNCPECA
AVSSIDVTLI KPDITAEVDD VTRCCCPGYP CGQLGGVQEI WIEGSSGGNS CKQLQVWLFG
QSQFGLKNYL MTVTPIYCDG TYKFELNKGL LQANGIDLCS IATGKYDVIV QAPGANNNFD
IRLGEPENTG DRFVLTTMPT DDSKLFKIEG KDSLYAGVAV KALIDGFNQD GIDDLYAHVT
FELKDKACEG NVDFTADKTQ GNAPLSVQFT DTSVMQGVSW AWTANGEAFS TEQNPKKVFD
KTGKYTIELT VTDAEGVSNT ATKDSYINVI SGPVADFSFN PASPVTGETV QFIDESLGSP
ASWQWSFGDA TSSSVQSPAH VYYLPGTYNV TLTVSDKYGD SSISKSVTVT GNPISTGLVA
DFTMAPASAY AGDQIQFTDK STGGTPTSWQ WEFGDNTTSS LQSPVHIYEK PGTYQVILNV
GDSRGVGVPK IVDYLVMNDA PVAAFSADPL SSEFYPVQVE FTDESTGVVD EWNWQILREG
KVVATSVEQN PTITFTVPGI YTVTLTVKNN GGSNSVTKDN YITIGTGSQF TIEQGWNHVS
VPMAVTDDYN TVSKLFKGIQ TGGVPYAVFN NAANEWVNVT DDYPVKPLEA LRVWKEDPGS
IVITPDYTKG GIFTRDLKLG WNGIGIMFMQ PTPANVALAS LGEAWNKTLM FNPLTQRWEY
PIIRGVDDDK FMYPTVGYLI EMNTDGILIG GE
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