7 homologs were found in PanDaTox collection
for query gene Caci_8586 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_8586  helix-turn-helix domain protein  100 
 
 
195 aa  374  1e-103  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0144747  normal  0.626282 
 
 
-
 
NC_013131  Caci_0015  transcriptional regulator, XRE family  82.78 
 
 
220 aa  284  5.999999999999999e-76  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8552  putative transcriptional regulator, XRE family  73.2 
 
 
153 aa  224  8e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0432705  hitchhiker  0.000227833 
 
 
-
 
NC_013131  Caci_8585  transcriptional regulator, XRE family  50.32 
 
 
182 aa  136  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0281082  normal  0.451635 
 
 
-
 
NC_013131  Caci_1982  transcriptional regulator, XRE family  42.41 
 
 
175 aa  108  7.000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0310879  normal 
 
 
-
 
NC_007512  Plut_1909  XRE family transcriptional regulator  37.68 
 
 
107 aa  43.1  0.003  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0726  putative phage repressor  41.79 
 
 
225 aa  42  0.005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.255707  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>