Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8585 |
Symbol | |
ID | 8339967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9956823 |
End bp | 9957371 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644961670 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003119245 |
Protein GI | 256397681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0281082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.451635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAA TTGATGATGC AGCGAAGCGC GCCTTCGAGC AGGTCATTGG CAAACTAAGG TCAGTCCGTC GGAGCGCCCG GATTTCGCAA GCTGCGTTGT CGCATCACAT CGGGGTCCTC GGCAAGACGA TCTCCGAGTG GGAGAACCTG CGGTTGGATC CCACCTTGGT GAACCTGACA CGCTGGTCTG ATGCGCTTGG CTGGTGCCTG GTGGTCATCG GCCCGGACGG CAAGGTGTTG CTGCCCGAGC CTCTGTGGTT GCTTCCAGGC GAGACGAGGG ATTCGTTCGG GCTGCGGCGA CTCGCCGGAC CATTGAAAAG TCGTCGCCAG GATTTGCCGT CGAGTCAAAA AGGCCTTGGT CGGCTCGTCG GCGTCAGCGG GTCGTCGATC TCGTATTGGG AGCTGGTTCG CATCCCTCCA CGATCGATCG CACAGTTCGT TTGGGCGCAG AAGCTTGGGT GCTCTATTGC TTTGTGGCCC AACGAGCTCA GCGGTACGGG ACCGTACTCA AGGTACGGTC CCGTACCGCG CATTGAATCA GGGGGCTAG
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Protein sequence | MLEIDDAAKR AFEQVIGKLR SVRRSARISQ AALSHHIGVL GKTISEWENL RLDPTLVNLT RWSDALGWCL VVIGPDGKVL LPEPLWLLPG ETRDSFGLRR LAGPLKSRRQ DLPSSQKGLG RLVGVSGSSI SYWELVRIPP RSIAQFVWAQ KLGCSIALWP NELSGTGPYS RYGPVPRIES GG
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