Gene Caci_8585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8585 
Symbol 
ID8339967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9956823 
End bp9957371 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID644961670 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003119245 
Protein GI256397681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0281082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.451635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA TTGATGATGC AGCGAAGCGC GCCTTCGAGC AGGTCATTGG CAAACTAAGG 
TCAGTCCGTC GGAGCGCCCG GATTTCGCAA GCTGCGTTGT CGCATCACAT CGGGGTCCTC
GGCAAGACGA TCTCCGAGTG GGAGAACCTG CGGTTGGATC CCACCTTGGT GAACCTGACA
CGCTGGTCTG ATGCGCTTGG CTGGTGCCTG GTGGTCATCG GCCCGGACGG CAAGGTGTTG
CTGCCCGAGC CTCTGTGGTT GCTTCCAGGC GAGACGAGGG ATTCGTTCGG GCTGCGGCGA
CTCGCCGGAC CATTGAAAAG TCGTCGCCAG GATTTGCCGT CGAGTCAAAA AGGCCTTGGT
CGGCTCGTCG GCGTCAGCGG GTCGTCGATC TCGTATTGGG AGCTGGTTCG CATCCCTCCA
CGATCGATCG CACAGTTCGT TTGGGCGCAG AAGCTTGGGT GCTCTATTGC TTTGTGGCCC
AACGAGCTCA GCGGTACGGG ACCGTACTCA AGGTACGGTC CCGTACCGCG CATTGAATCA
GGGGGCTAG
 
Protein sequence
MLEIDDAAKR AFEQVIGKLR SVRRSARISQ AALSHHIGVL GKTISEWENL RLDPTLVNLT 
RWSDALGWCL VVIGPDGKVL LPEPLWLLPG ETRDSFGLRR LAGPLKSRRQ DLPSSQKGLG
RLVGVSGSSI SYWELVRIPP RSIAQFVWAQ KLGCSIALWP NELSGTGPYS RYGPVPRIES
GG