Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8552 |
Symbol | |
ID | 8339932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9924415 |
End bp | 9924876 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644961636 |
Product | putative transcriptional regulator, XRE family |
Protein accession | YP_003119213 |
Protein GI | 256397649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0432705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000227833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCTGC AAGTTGATGA CGTGGCGGAA CGGGCGTTCG TGCGGATCGT TGGTGCTCTG CGATCAGTGC GCGTGACTTC CGAGCGTTCC CAAAACTCGC TCTCTACCTT TCTTCCGGTT CGAGGCCGAG CGATCTCCGA ATGGGAGACG GGAGCCATCC AGCCCAAGCT GAGCCATCTG ATCCAGTGGT CCTGGGAGCT TGACCGACGC CTGGTGATCG TCGGGCGTGA CGGCGAGCTG CGCAACGACT CGCTGCGACA GCGTCCGGGC GAATCGTGGG AGGTCTTTGA ACGAAGGCGG CTAGCTACTC CGCTGCGGAA TCGCCGCCAA GCCATGGGGA TGGCCCAGGG AGAACTCGCC GACCTTGTCG GAGTCACCCG CGACTCGATC CAGCGCTGGG AGCTTGTTCG CGTGCCTCCA CGACCGATCG CGCTCATCGT GTGGGCTCAG AAGCTGGGCT GA
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Protein sequence | MPLQVDDVAE RAFVRIVGAL RSVRVTSERS QNSLSTFLPV RGRAISEWET GAIQPKLSHL IQWSWELDRR LVIVGRDGEL RNDSLRQRPG ESWEVFERRR LATPLRNRRQ AMGMAQGELA DLVGVTRDSI QRWELVRVPP RPIALIVWAQ KLG
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