Gene Caci_8552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8552 
Symbol 
ID8339932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9924415 
End bp9924876 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID644961636 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003119213 
Protein GI256397649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0432705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000227833 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCTGC AAGTTGATGA CGTGGCGGAA CGGGCGTTCG TGCGGATCGT TGGTGCTCTG 
CGATCAGTGC GCGTGACTTC CGAGCGTTCC CAAAACTCGC TCTCTACCTT TCTTCCGGTT
CGAGGCCGAG CGATCTCCGA ATGGGAGACG GGAGCCATCC AGCCCAAGCT GAGCCATCTG
ATCCAGTGGT CCTGGGAGCT TGACCGACGC CTGGTGATCG TCGGGCGTGA CGGCGAGCTG
CGCAACGACT CGCTGCGACA GCGTCCGGGC GAATCGTGGG AGGTCTTTGA ACGAAGGCGG
CTAGCTACTC CGCTGCGGAA TCGCCGCCAA GCCATGGGGA TGGCCCAGGG AGAACTCGCC
GACCTTGTCG GAGTCACCCG CGACTCGATC CAGCGCTGGG AGCTTGTTCG CGTGCCTCCA
CGACCGATCG CGCTCATCGT GTGGGCTCAG AAGCTGGGCT GA
 
Protein sequence
MPLQVDDVAE RAFVRIVGAL RSVRVTSERS QNSLSTFLPV RGRAISEWET GAIQPKLSHL 
IQWSWELDRR LVIVGRDGEL RNDSLRQRPG ESWEVFERRR LATPLRNRRQ AMGMAQGELA
DLVGVTRDSI QRWELVRVPP RPIALIVWAQ KLG