Gene Caci_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1982 
Symbol 
ID8333325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2241275 
End bp2241802 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID644955131 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003112743 
Protein GI256391179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0310879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GGGGAAGCGC AGGGGCACGA CGACGGCTCG GTGAGATGCA GTCGCAGCTG 
CTGTCAGCCA GGCATGCTGC CAGCCTTCCA CAACAAACAC TCAGCGACAC ACTGGGAGTC
GCGGCGCGAA CCCTTCGGGA CTGGGAAAAG GGTTACGACA CACCGAGCTT GAAGCATTTG
ATCACCTGGG CGGACGCACT GGGATTCCGC CTGGTCGTCG TGGACTCGCT CGGAAGCGCG
GACCAAGAAG TGGTCGAGGC GGAGGACGGC GAGCCCTTCG AGCGTCACGA AATGCGACGG
CTGACGCGGC CGCTGTGGAC AAGGCGCAAG GCGCGAAAAC TGTCGCAAGG CGACTTAGCC
TTACTGCTCG GGGTCAGCAG GGCATCGGTG CAACGCTGGG AGGACGCGGA CAAGTTTCCG
CGTCCGATCG CCTTGATCGC GTGGGCCGGA CGCCTGGAAT GCTCCGTCGA GCTCGACCGC
GTCACCTCAG AGAATGACCG ACCGCAACCC GGCCGCGAAG AAGCCTGA
 
Protein sequence
MELRGSAGAR RRLGEMQSQL LSARHAASLP QQTLSDTLGV AARTLRDWEK GYDTPSLKHL 
ITWADALGFR LVVVDSLGSA DQEVVEAEDG EPFERHEMRR LTRPLWTRRK ARKLSQGDLA
LLLGVSRASV QRWEDADKFP RPIALIAWAG RLECSVELDR VTSENDRPQP GREEA