Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1982 |
Symbol | |
ID | 8333325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2241275 |
End bp | 2241802 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644955131 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003112743 |
Protein GI | 256391179 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0310879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC GGGGAAGCGC AGGGGCACGA CGACGGCTCG GTGAGATGCA GTCGCAGCTG CTGTCAGCCA GGCATGCTGC CAGCCTTCCA CAACAAACAC TCAGCGACAC ACTGGGAGTC GCGGCGCGAA CCCTTCGGGA CTGGGAAAAG GGTTACGACA CACCGAGCTT GAAGCATTTG ATCACCTGGG CGGACGCACT GGGATTCCGC CTGGTCGTCG TGGACTCGCT CGGAAGCGCG GACCAAGAAG TGGTCGAGGC GGAGGACGGC GAGCCCTTCG AGCGTCACGA AATGCGACGG CTGACGCGGC CGCTGTGGAC AAGGCGCAAG GCGCGAAAAC TGTCGCAAGG CGACTTAGCC TTACTGCTCG GGGTCAGCAG GGCATCGGTG CAACGCTGGG AGGACGCGGA CAAGTTTCCG CGTCCGATCG CCTTGATCGC GTGGGCCGGA CGCCTGGAAT GCTCCGTCGA GCTCGACCGC GTCACCTCAG AGAATGACCG ACCGCAACCC GGCCGCGAAG AAGCCTGA
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Protein sequence | MELRGSAGAR RRLGEMQSQL LSARHAASLP QQTLSDTLGV AARTLRDWEK GYDTPSLKHL ITWADALGFR LVVVDSLGSA DQEVVEAEDG EPFERHEMRR LTRPLWTRRK ARKLSQGDLA LLLGVSRASV QRWEDADKFP RPIALIAWAG RLECSVELDR VTSENDRPQP GREEA
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