13 homologs were found in PanDaTox collection
for query gene Bamb_0141 on replicon NC_008390
Organism: Burkholderia ambifaria AMMD



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008390  Bamb_0141  hypothetical protein  100 
 
 
528 aa  1054    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0154  hypothetical protein  94.26 
 
 
529 aa  884    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0148  hypothetical protein  68.97 
 
 
525 aa  590  1e-167  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.444838  normal  0.443885 
 
 
-
 
NC_007510  Bcep18194_A3332  hypothetical protein  62.89 
 
 
555 aa  522  1e-147  Burkholderia sp. 383  Bacteria  normal  normal  0.781513 
 
 
-
 
NC_008060  Bcen_2876  hypothetical protein  64.24 
 
 
534 aa  495  9.999999999999999e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0231  hypothetical protein  64.24 
 
 
534 aa  495  9.999999999999999e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0215  hypothetical protein  64.04 
 
 
538 aa  494  9.999999999999999e-139  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.886026  normal  0.752932 
 
 
-
 
NC_011884  Cyan7425_4154  hypothetical protein  31.92 
 
 
496 aa  172  1e-41  Cyanothece sp. PCC 7425  Bacteria  normal  0.525176  normal  0.347799 
 
 
-
 
NC_007413  Ava_3829  hypothetical protein  45.16 
 
 
302 aa  144  5e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2019  hypothetical protein  32.26 
 
 
475 aa  126  9e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.38806  normal  0.225432 
 
 
-
 
NC_013132  Cpin_5309  hypothetical protein  26.33 
 
 
486 aa  121  1.9999999999999998e-26  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00173209  normal  0.131946 
 
 
-
 
NC_007802  Jann_3301  hypothetical protein  45.04 
 
 
274 aa  111  4.0000000000000004e-23  Jannaschia sp. CCS1  Bacteria  normal  normal  0.106064 
 
 
-
 
NC_008255  CHU_0421  hypothetical protein  34.62 
 
 
462 aa  71.6  0.00000000004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>