| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5309 |
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| Symbol | |
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| ID | 8361486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6780457 |
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| End bp | 6781917 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967457 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124941 |
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| Protein GI | 256424288 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4278] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00173209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.131946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG AACAGCAAAC CCTCTGGACG AAGATCCAGG CATTCAATTT CGATGGCGGA
AGTCCCGTCA ATCACTTTAC TAAAAAACTG GCAGCAGAAC AAAACTGGAC AATCGCCTTC
ACACAAAAGG CCATTGAAGA GTATAAAAAA TTCATGCTGC TCTGCTGTAC CTCTCCTACA
GGTGCAGCCC CCTCGCAAAT TGTTGACGAG GTATGGCACC TTCACCTGAC TCACACCCAG
TCTTACTGGA CAGACTTCTG CCGGAACACC CTGGGACAGG ACGTACATCA CTATCCTTCC
ATGGGAGGTA CGCAGGAAGA TTACAAACAC CTGAACTGGT ATAAGACCAC TAAAAGATTA
TACCACCGGA CCTTCGGCAC AGAAGCCCCG GAAGATATAT GGCCGACACC GAAGGAATTC
GTTCCGGTAC CAGAGGATCC TATCATTAAA TGGACGCCTG CATTGAAAGG ATGGTTTACC
GCCTTATGCG TACTACCGTT TATCTTCTCC GGACTGATAT TCAAAAAGCT CTCCCCTTTC
GATCTGAAAG GTCCGCAGTT CCTGGTGTTC TTTTTTGTAT ACGCCAGTTG CCTGCTCACC
ATTCTGGCCG TCTACCTGGA AAGTAGTAAA CAGCAGGCGG TCGACGTACT GAAAAGATAC
TTCCCGGATG ATATATCTCC TTATCAGATA GCAGCCTTCG TATACGGCAG AGCCAGGGCC
GTACAGACCG GGATTGTAGA TCTTGTTAAA CGGGGATTGA TCATTCCCCA AGGAGATCAT
GCATTCGTTT TAAATAAGCG GGGCTATATG CCAAGGTTAA ACGAAACAAA TCCGTTAATA
CCTGGCTTTG AAGCAGAAAA TGATGATGCA GATGTTATCT ATACTGAGAT CTCTTCCCGC
TGGTACAACC CCGATGAAGC CAGTCATCCG TTAATGGTTG CACTGGACAA ATTTGCCGTA
CAACACCGGC CTTTCATCAA CATCCTATAC ATCGCATTAT ATGGTATGGC CGGGGCAAGG
CTTATACAGG GATTGATTAA CGGGAAAGCC GTCGGATACC TGATATTCGA AATAGTTATC
GTATTCGTGA TCAGCAAACT GACCAGCGCC GCTGCGCGGA GAGATCTCGC CATGTACCAG
GCGGCAAAAG ACTGCTTTAT TGAAAAATTT GGGGAGAATC CTGATAAGAC AGACAACATC
GTACCCGGAT TTGCGGTGAA CGGATTATCC GCAGTCAGTG GTTTTGCTGA AATAGGATTT
CTTACCGGCA TGTTTGCTAC ATATACCAGC AGCGCTTTCA GAAATGAACG TGGAGAGCCG
GTGAATAAAG ACTTTGGTGG TGCTTCCAGT TGTAGTAGCG GTGGATCGGG CTGTAGTGGC
AGTAGTTGCA GTAGTGGAGG AAGTGGATGC GGAAGCAGTT GTGGTGGTGG ATGCGGGGGT
TGCGGAGGAG GCGGTGACTA A
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| Protein sequence | MTQEQQTLWT KIQAFNFDGG SPVNHFTKKL AAEQNWTIAF TQKAIEEYKK FMLLCCTSPT
GAAPSQIVDE VWHLHLTHTQ SYWTDFCRNT LGQDVHHYPS MGGTQEDYKH LNWYKTTKRL
YHRTFGTEAP EDIWPTPKEF VPVPEDPIIK WTPALKGWFT ALCVLPFIFS GLIFKKLSPF
DLKGPQFLVF FFVYASCLLT ILAVYLESSK QQAVDVLKRY FPDDISPYQI AAFVYGRARA
VQTGIVDLVK RGLIIPQGDH AFVLNKRGYM PRLNETNPLI PGFEAENDDA DVIYTEISSR
WYNPDEASHP LMVALDKFAV QHRPFINILY IALYGMAGAR LIQGLINGKA VGYLIFEIVI
VFVISKLTSA AARRDLAMYQ AAKDCFIEKF GENPDKTDNI VPGFAVNGLS AVSGFAEIGF
LTGMFATYTS SAFRNERGEP VNKDFGGASS CSSGGSGCSG SSCSSGGSGC GSSCGGGCGG
CGGGGD
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