14 homologs were found in PanDaTox collection
for query gene Avi_7140 on replicon NC_011981
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011981  Avi_7140  AraC-like transcriptional regulator  100 
 
 		 174 aa  353  5e-97  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_3975  helix-turn-helix domain-containing protein  36.36 
 
 		 302 aa  108  4.0000000000000004e-23  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_1279  helix-turn-helix domain-containing protein  41.48 
 
 		 306 aa  102  3e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.665979 
 
 
-
 
NC_010625  Bphy_5716  AraC family transcriptional regulator  36.03 
 
 		 304 aa  87.8  6e-17  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A1981  AraC family transcriptional regulator  34.29 
 
 		 384 aa  87.4  1e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  0.382238  n/a   
 
 
-
 
NC_009075  BURPS668_A0682  AraC family transcriptional regulator  34.29 
 
 		 300 aa  87.4  1e-16  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0589  AraC family transcriptional regulator  34.29 
 
 		 300 aa  87.4  1e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B2379  AraC family transcriptional regulator  35.77 
 
 		 304 aa  85.1  4e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.0538221  normal  1 
 
 
-
 
NC_010676  Bphyt_6135  transcriptional regulator, AraC family  34.07 
 
 		 305 aa  80.9  0.000000000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_1480  AraC family transcriptional regulator  30.88 
 
 		 306 aa  72  0.000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.237942  n/a   
 
 
-
 
NC_008544  Bcen2424_6349  AraC family transcriptional regulator  30.88 
 
 		 306 aa  72  0.000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0502154  normal  1 
 
 
-
 
NC_010512  Bcenmc03_7015  AraC family transcriptional regulator  30.15 
 
 		 306 aa  70.9  0.000000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0570551 
 
 
-
 
NC_008392  Bamb_5827  AraC family transcriptional regulator  32.37 
 
 		 302 aa  70.1  0.00000000002  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_5610  AraC family transcriptional regulator  32.37 
 
 		 302 aa  69.7  0.00000000002  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00190409  normal  0.169642 
 
 
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