| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3975 |
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| Symbol | |
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| ID | 5318108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 426118 |
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| End bp | 427026 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775784 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001312717 |
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| Protein GI | 150376121 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CTTCTTCAGA CGTCGCCGGC CCGCGCCCCC GCGACAGCCT TGGCTGTTCC
GTGGAAAAGC TGGACGAGGA CCGCACGATC GACGGCGGCA ACATGACGTT TCACCGCAAG
CGTTCCGCGA GGGCACCTGC CGGCCGGGTC AGCACGCCGG CCACCGGTCG TGGCTATCTG
ATAGGTGTTT CGGCGTCGGG CGGCCATCGG CGACGAATAA TCCGGGAGCA TCATTCCACG
GTCCACGATT TCGAAGAGAA TTCGATCTAT GTGAGAACCT TTTCGGACGA TTATCGGGCA
GACCTCAACG GTTCTTTCGA CTTCATGCTC CTTGAGGTCA GCCATAGCGC GCTCGAGCGG
ATCACCGATG GGGCGGACAT CAAAGGTGTC ACGGAATTGA ATTCCGTTGC GGGACACGCT
GACCCGGTGC TCGGCGGCAT GCTGGGCGCA CTGTTTGCAA CCGTCGACGG GCAGGCCGGC
AGAAGCGCGC TCTTCGTCGA TCAGCTCTCC GCCGCCATAG GCATCCATCT CGTGCGCCAG
TACGGGAACG GTCGCGGTCG CGCGGCGGGT AAAGGGCGCA GGCTTTCCAT GCGTTCTCAG
TCGTTGCTCA AGGATCTCGC GCAGAGCAGA CTGGCCGGAG ACCTGACCGT CGAAGAGCTC
GCCGGGATAT GCCAGCTGTC GCAGGCCACC TTCCTGCGCG CCTTCCGCGA AACTCTGGGG
AAGACGCCGC ACCAGTGGCT GTCGCAACAG CGGATAGAGA AGGCCATCCA TCTGCTGGAG
TTCACGCAAG CGCCGCTCCG GGAAATCGCC ACCCTTTGCG GCTTTTCGGA TCAGAGCCAT
TTCACGCGTG CCTTCGTGCA GGCGATGGGC GCGACGCCGG GCGTGTGGAG AAGACACCGG
CAGTCGTGA
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| Protein sequence | MTNASSDVAG PRPRDSLGCS VEKLDEDRTI DGGNMTFHRK RSARAPAGRV STPATGRGYL
IGVSASGGHR RRIIREHHST VHDFEENSIY VRTFSDDYRA DLNGSFDFML LEVSHSALER
ITDGADIKGV TELNSVAGHA DPVLGGMLGA LFATVDGQAG RSALFVDQLS AAIGIHLVRQ
YGNGRGRAAG KGRRLSMRSQ SLLKDLAQSR LAGDLTVEEL AGICQLSQAT FLRAFRETLG
KTPHQWLSQQ RIEKAIHLLE FTQAPLREIA TLCGFSDQSH FTRAFVQAMG ATPGVWRRHR
QS
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