| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5610 |
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| Symbol | |
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| ID | 6182693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 110433 |
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| End bp | 111341 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688742 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001815606 |
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| Protein GI | 172064894 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00190409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.169642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATG CCCTCGTCGC GCCCGCCGCG GCACCACCCA AAGACACGCT CGGCTGCATC
GCGAACCTGC TGTCCAAGGA TATTGAAAGG TCCGCGGGCG GCCTGACGCT CCATCGCAAA
TGCATGCGCG ACGAACAGTT CGAGCGCATC GAGATGGCGG CCAGCGATCG CGGCTTCCTG
ATCGGCGTAT CGCTGAATGC CGGCCACCGG CGGACGATCT ACCGCGGGTC CGGCAAATCC
GAGCGGCGGT TTCAGCACAA CTCCATCTAC ATTCGCGACT TTTCGCGAAA TTTCCGCGCC
GACCTCTACG GCAAGTTCGA TTTCGTCCTC GTCGAGCTGT CGCATCGCTA TCTGGGCGAC
CTCGGCCGTG AGCACGACGG TCTGGAAATC GGCGGCCTGA GTTGCGCGCC CGACGTGCAG
GACGCGGTGC TGGGCCACCT CGCGCAAGCC GTCGCCGACA GCCTCGACGG GTCCGGCGCG
CTGAACGCGT TGTTCGTCGA GCAGATGGGG CTCGCGATCG GCACGCATCT GGCCTGCCGT
TACGGCCATG CGCGCGCGCG CGACCTGGAG CGCAAGGGCA CTCTGTCGCC GGTCAAGGTT
GCGCTCGCCA AGGAGCTTCT GATGGAGAAG GCGGACCTCG GCGTGTCGAT CGAGGAAGTC
GCCAACGAAT GCGATCTGTC GCGCGGCTAT TTCATCCGCG CGTTCTCGCG CGCGACCGGA
CGCACGCCGC ATCAATGGCT GCTCGAACAG CGCGTGGTCC GCGCGCGCCA ACTGATCGAG
ACGACCGACA TGACGCTCGC GGAAATCGCG GCCGCCTGCG GCTTCTCGGA CCAGAGCCAT
CTGAACCGCC TGTTCGCCCG CATCGTCGGC CATCCGCCGG GCGCATGGCG GCGCGGCATG
GCGCGCTGA
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| Protein sequence | MPDALVAPAA APPKDTLGCI ANLLSKDIER SAGGLTLHRK CMRDEQFERI EMAASDRGFL
IGVSLNAGHR RTIYRGSGKS ERRFQHNSIY IRDFSRNFRA DLYGKFDFVL VELSHRYLGD
LGREHDGLEI GGLSCAPDVQ DAVLGHLAQA VADSLDGSGA LNALFVEQMG LAIGTHLACR
YGHARARDLE RKGTLSPVKV ALAKELLMEK ADLGVSIEEV ANECDLSRGY FIRAFSRATG
RTPHQWLLEQ RVVRARQLIE TTDMTLAEIA AACGFSDQSH LNRLFARIVG HPPGAWRRGM
AR
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