8 homologs were found in PanDaTox collection
for query gene Amir_4308 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4308  hypothetical protein  100 
 
 
253 aa  488  1e-137  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2021  hypothetical protein  47.97 
 
 
281 aa  185  7e-46  Frankia sp. EAN1pec  Bacteria  normal  0.182904  normal  0.272276 
 
 
-
 
NC_013131  Caci_2772  hypothetical protein  45.04 
 
 
246 aa  129  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4814  hypothetical protein  28.57 
 
 
232 aa  55.8  0.0000006  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0860408 
 
 
-
 
NC_007777  Francci3_2990  hypothetical protein  40.35 
 
 
219 aa  51.6  0.00001  Frankia sp. CcI3  Bacteria  normal  normal  0.224353 
 
 
-
 
NC_008726  Mvan_5302  alpha/beta hydrolase fold  27.5 
 
 
255 aa  50.1  0.00004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.289331  normal  0.304244 
 
 
-
 
NC_007777  Francci3_2816  hypothetical protein  31.39 
 
 
276 aa  47.8  0.0002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1469  alpha/beta hydrolase fold  28.57 
 
 
254 aa  47  0.0003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.443386  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>