33 homologs were found in PanDaTox collection
for query gene Amir_2567 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  100 
 
 
359 aa  678    Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  44.48 
 
 
363 aa  194  2e-48  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  45.15 
 
 
335 aa  187  2e-46  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  41.45 
 
 
347 aa  185  1.0000000000000001e-45  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  41.78 
 
 
347 aa  185  1.0000000000000001e-45  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  44.24 
 
 
392 aa  184  2.0000000000000003e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  40.19 
 
 
332 aa  184  2.0000000000000003e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  42.71 
 
 
347 aa  181  1e-44  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  40.79 
 
 
347 aa  182  1e-44  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  42.23 
 
 
388 aa  180  2.9999999999999997e-44  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  39.54 
 
 
337 aa  177  3e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  40.52 
 
 
337 aa  176  5e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  32.14 
 
 
362 aa  165  9e-40  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  43.56 
 
 
333 aa  160  3e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_014151  Cfla_0512  hypothetical protein  41.86 
 
 
338 aa  152  1e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0189199  decreased coverage  0.000000311595 
 
 
-
 
NC_008541  Arth_0335  hypothetical protein  37.77 
 
 
341 aa  149  1.0000000000000001e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4937  acyl-CoA dehydrogenase-related protein  38.11 
 
 
334 aa  147  2.0000000000000003e-34  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_01080  hypothetical protein  39.74 
 
 
372 aa  144  3e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20110  hypothetical protein  38.68 
 
 
382 aa  140  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.252423  normal  0.481515 
 
 
-
 
NC_013235  Namu_3272  putative acyl-CoA dehydrogenase-related protein  42.33 
 
 
396 aa  134  1.9999999999999998e-30  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000123433  hitchhiker  0.0000576183 
 
 
-
 
NC_011886  Achl_0555  hypothetical protein  36.96 
 
 
350 aa  122  8e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_0021  dehydrogenase  41.14 
 
 
313 aa  112  1.0000000000000001e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0755375  normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  31.49 
 
 
412 aa  80.5  0.00000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  31.74 
 
 
382 aa  73.6  0.000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  31.5 
 
 
391 aa  73.2  0.000000000006  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  31.5 
 
 
391 aa  72.8  0.000000000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  29.87 
 
 
385 aa  71.2  0.00000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  30.13 
 
 
382 aa  68.2  0.0000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  25.33 
 
 
391 aa  65.9  0.000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  29.6 
 
 
322 aa  65.1  0.000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  27.97 
 
 
364 aa  61.2  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  28.25 
 
 
381 aa  52.8  0.00001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  27.3 
 
 
373 aa  45.4  0.002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
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