17 homologs were found in PanDaTox collection
for query gene Tcr_R0008 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007520  Tcr_R0008  SRP RNA; RNA component of signal recognitionparticle  100 
 
 		 115 bp  228  2e-58  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  7.72786e-17  n/a   
 
 
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NC_013522  Taci_R0008  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 114 bp  58  0.0000005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000000137936  n/a   
 
 
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NC_012034  Athe_R0010  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 92 bp  58  0.0000005  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000232176  n/a   
 
 
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NC_011126  HY04AAS1_R0018  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 83 bp  58  0.0000005  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
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NC_008009  Acid345_R0021  SRP RNA; RNA component of signal recognition particle  100 
 
 		 114 bp  56  0.000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
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NC_008609  Ppro_R0001  SRP RNA; RNA component of signal recognition particle  96.77 
 
 		 106 bp  54  0.000008  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00137398  n/a   
 
 
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NC_014150  Bmur_R0037  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 87 bp  50.1  0.0001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.35285e-20  n/a   
 
 
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NC_013525  Tter_R0006  SRP RNA; RNA component of signal recognitionparti cle  93.94 
 
 		 103 bp  50.1  0.0001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
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NC_011661  Dtur_R0033  SRP RNA; RNA component of signal recognitionparti cle  93.94 
 
 		 90 bp  50.1  0.0001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_009635  Maeo_R0035  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 308 bp  50.1  0.0001  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
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NC_008700  Sama_R0049  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 115 bp  50.1  0.0001  Shewanella amazonensis SB2B  Bacteria  normal  1  hitchhiker  0.00010102 
 
 
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NC_011901  Tgr7_R0017  SRP RNA; RNA component of signal recognitionparti cle  85.71 
 
 		 118 bp  48.1  0.0005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_008751  Dvul_R0064  SRP RNA; RNA component of signal recognition particle  96.43 
 
 		 89 bp  48.1  0.0005  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
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NC_013889  TK90_R0044  SRP RNA; RNA component of signal recognition particle  85.71 
 
 		 119 bp  48.1  0.0005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0198539  normal  0.360014 
 
 
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NC_010571  Oter_R0072    93.55 
 
 		 103 bp  46.1  0.002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.379249 
 
 
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NC_009483  Gura_R0057  SRP RNA; RNA component of signal recognition particle  96.3 
 
 		 124 bp  46.1  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0673338  n/a   
 
 
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NC_011071  Smal_R0031  SRP RNA; RNA component of signal recognition particle  85.19 
 
 		 115 bp  44.1  0.008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
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