8 homologs were found in PanDaTox collection
for query gene RoseRS_0058 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_0058  ECF subfamily RNA polymerase sigma-24 factor  100 
 
 		 215 aa  438  9.999999999999999e-123  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.790094 
 
 
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NC_009767  Rcas_4190  FliA/WhiG family RNA polymerase sigma 28 subunit  64.35 
 
 		 220 aa  270  2e-71  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.000210037 
 
 
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NC_013595  Sros_1156  RNA polymerase, sigma-24 subunit, ECF subfamily  26.25 
 
 		 212 aa  44.3  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.493631  normal  0.957952 
 
 
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NC_014165  Tbis_0621  ECF subfamily RNA polymerase sigma-24  24.85 
 
 		 208 aa  43.5  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.939664  normal  0.179191 
 
 
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NC_009675  Anae109_1848  RNA polymerase sigma factor RpoH  33.33 
 
 		 307 aa  42.7  0.004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.370084  normal  0.912724 
 
 
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NC_010320  Teth514_1664  RNA polymerase, sigma 28 subunit, FliA/WhiG  25.93 
 
 		 246 aa  42.7  0.004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000322849  n/a   
 
 
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NC_009664  Krad_1411  RNA polymerase sigma factor WhiG  30.77 
 
 		 312 aa  42.4  0.006  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.122165 
 
 
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NC_009523  RoseRS_4616  RpoD family RNA polymerase sigma factor  28.1 
 
 		 401 aa  41.6  0.009  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.317944 
 
 
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