Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1848 |
Symbol | |
ID | 5376860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 2106396 |
End bp | 2107319 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640843356 |
Product | RNA polymerase sigma factor RpoH |
Protein accession | YP_001379035 |
Protein GI | 153004710 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.370084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.912724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGCA TCGCGATCCC GACGACCACC AGCTCCCTCG AGCTGTATCT ATCGGAGATC AATCGCTTTC CTCTCCTGAC GGTGGACGAG GAGCAGCGCC TCGCGCGGCT GTTCCGGGAC GAGGGCGACA CGCGCGCGGC GCACCGGCTG GTCACGGCCA ACCTGCGCTT CGTCGTGAAG GTGTCCTACG AGTACCGCTC CTACGGCTTC AAGATGGCCG ACCTCATCCA GGAGGGGAAC ATCGGCCTGA TGAAGGCGGT CCAGAAGTTC GACCCGGACA AGGGGATCCG ACTCATCTCC TACGCCGTCT GGTGGATCCG GGCGTACATC CAGAACTACA TCCTCAAGTC GTGGTCGCTC GTGAAGCTGG GGACGACCCA GGCACAGCGG AAGCTGTTCT TCTCTCTCGC GCGGACCAAG CGCGAGCTCG ACAAGATGTC GGTCGAGCAC GGCCGCGACT CCGACGCGCA GGACAAGGGC AAGATCGCGA AGAAGCTCCG CGTGAAGCCG GCCGAGGTCG AGGAGATGGA GCAGCGGATG GACGGCCGCG ATCTCTCCCT CGACGCGCCG ATGGGCGACG ACGGCGGCTA CTCCCACATC GACTTCGTGG CCGCGAAGTC GGCGGCGCAG GACGACGAGC TCTCCGACGC CGAGGAGCAG CAGATCGTCT CCGCCAAGGT CACCGCCGCG CTCGCGCGGC TCGACCAGCG CGAGCGGTAC ATCATCGAGC AGCGCGTCAT GAGCGATCGC CCGCTCACGT TGAAGGAGCT GGGCGAGCAC TTCGGGTTCT CCCGCGAGCG CGCGCGCCAG CTCGAGATCC GCGCCAAGGA GAAGCTGAAG CAGGAGCTGC ACGCGCTCGC GGCGGAGATC GACTACCCGA CGGACGGCAG ACCGATCGAC ATCGACGACG CGGCGCTGGC GTAG
|
Protein sequence | MKRIAIPTTT SSLELYLSEI NRFPLLTVDE EQRLARLFRD EGDTRAAHRL VTANLRFVVK VSYEYRSYGF KMADLIQEGN IGLMKAVQKF DPDKGIRLIS YAVWWIRAYI QNYILKSWSL VKLGTTQAQR KLFFSLARTK RELDKMSVEH GRDSDAQDKG KIAKKLRVKP AEVEEMEQRM DGRDLSLDAP MGDDGGYSHI DFVAAKSAAQ DDELSDAEEQ QIVSAKVTAA LARLDQRERY IIEQRVMSDR PLTLKELGEH FGFSRERARQ LEIRAKEKLK QELHALAAEI DYPTDGRPID IDDAALA
|
| |