13 homologs were found in PanDaTox collection
for query gene RoseRS_0002 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0002  class II aldolase/adducin family protein  100 
 
 
391 aa  806    Roseiflexus sp. RS-1  Bacteria  normal  0.0529715  unclonable  0.0000097128 
 
 
-
 
NC_009767  Rcas_3879  class II aldolase/adducin family protein  91.56 
 
 
391 aa  747    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0500117 
 
 
-
 
NC_014212  Mesil_0901  class II aldolase/adducin family protein  53.12 
 
 
357 aa  354  1e-96  Meiothermus silvanus DSM 9946  Bacteria  normal  0.668515  normal  0.139586 
 
 
-
 
NC_013946  Mrub_2035  class II aldolase/adducin family protein  53.65 
 
 
368 aa  348  7e-95  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4750  class II aldolase/adducin family protein  29.8 
 
 
208 aa  59.7  0.0000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_4650  ribulose-5-phosphate 4-epimerase and related epimerase and aldolases  24.43 
 
 
198 aa  52.4  0.00002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0724066 
 
 
-
 
NC_012034  Athe_0695  class II aldolase/adducin family protein  27.91 
 
 
428 aa  49.7  0.00008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1874  class II aldolase/adducin family protein  31.29 
 
 
221 aa  45.4  0.001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8915  hypothetical protein  24.77 
 
 
474 aa  44.7  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.413969  normal  0.215527 
 
 
-
 
NC_010424  Daud_0650  class II aldolase/adducin family protein  27.95 
 
 
222 aa  44.3  0.004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.249121  n/a   
 
 
-
 
NC_011206  Lferr_0598  methylthioribulose-1-phosphate dehydratase  36.73 
 
 
206 aa  44.3  0.004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.635649  normal 
 
 
-
 
NC_011761  AFE_0436  aldolase, class II  36.73 
 
 
206 aa  44.3  0.004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_0929  class II aldolase/adducin family protein  28.8 
 
 
239 aa  43.5  0.006  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
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