Gene RoseRS_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0002 
Symbol 
ID5206935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2021 
End bp3196 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID640593636 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001274395 
Protein GI148654190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0529715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000097128 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCATCAGG ATACCTGGAC GCCGTTGATG GGGCCGAGTC TTGCCCCTGA CGAGCATCTG 
ACCTTTACAA CTGCTGGAAA CACCCGAAGC GCATTCGTTC TCTGGTTTGC GCAGGGGTTA
AGCGCGGCGC TGGAACGCCA CGGACATGCG TTCATCGCGC CCGACGCCCC TACAGACGAT
GAAGCTCCTG AATCACCGCC TGCACGCCTG GTGTTGAACC TGTGCGATCT TGATCGCCCA
CGACCGATCC ATCGCCGTGG ACAGGGCACA TTTGTTGTGA CCATTGTTGA GGGGGAAGAC
AACCAGCGTG ATGTGATGAA AGCGGCGTAT CCGCTGATTG TGCGCTCGCT GGCAAACATG
GTGATTTACA ACACGCGCAT CGATGGCGTG CTCGAAAGCC ATTTCGTCAC CATCGAGCAG
GGGCACTACA CGGTGCGACT CGAAGGTGAC GAGCAGACAT TCTTCGATCA GATCTATCGG
CGCATTCAGC CACTGGCGTG CAGTCATCTG GTGATCAACA ACAAGTTCAC GCCCGACCTG
CCGGATTATC TGTGGGAGGG CGATGAAGCC ACACGCCAGA TCAGTTGGGC GGGGCGGCAA
CTCGATGGGA TGGGCCTGCT GCCAGCGGCA ATCCCGATCC ACGAATACCT TTCGGAGCGC
GAACTGCGCC ACGTCAGGCG ATTGTACGGC ATTGGCGGTC TCAGTTATGG CAACCTCAGC
GCCCGCGCGC TCCACAACCC GGATTATTTC TGGATGTCGG CATCGGGGGT TGACAAGAGC
CGCCTTGAGG TGGTGGGGCG CGACATTCTG CTGGTCACCG GGTATGATCC ACAAAACCTG
CAGATCAACC TGAGCGTGCC GCCACATATC GAGCCGCGTC GTGTTTCGGT CGACGCCATC
GAGCACTACA TGATCTATCG CGAGCATCCG CAGGTGCAGG CGATCATTCA CATCCACGCC
TGGTGGCGCG ATCCCATTCC TTCCACACAG GTCAACTATC CGTGCGGCAC CTACGAACTT
GCCGCCGAGG TAGCGGAACT GGTGCGTCAG GCGCCCGATC CGTCACGCGC GGTGATCGGC
TTGAAAAATC ACGGACTGAC CATCACCGGT CATTCGATCC CGGAGATTTT CCAGCGTATC
GAGGGGATGA TCGTCCCGCA GGTGCCCATG TCGTAA
 
Protein sequence
MHQDTWTPLM GPSLAPDEHL TFTTAGNTRS AFVLWFAQGL SAALERHGHA FIAPDAPTDD 
EAPESPPARL VLNLCDLDRP RPIHRRGQGT FVVTIVEGED NQRDVMKAAY PLIVRSLANM
VIYNTRIDGV LESHFVTIEQ GHYTVRLEGD EQTFFDQIYR RIQPLACSHL VINNKFTPDL
PDYLWEGDEA TRQISWAGRQ LDGMGLLPAA IPIHEYLSER ELRHVRRLYG IGGLSYGNLS
ARALHNPDYF WMSASGVDKS RLEVVGRDIL LVTGYDPQNL QINLSVPPHI EPRRVSVDAI
EHYMIYREHP QVQAIIHIHA WWRDPIPSTQ VNYPCGTYEL AAEVAELVRQ APDPSRAVIG
LKNHGLTITG HSIPEIFQRI EGMIVPQVPM S