44 homologs were found in PanDaTox collection
for query gene RSP_1500 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_1500  anti-sigma regulatory kinase  100 
 
 
180 aa  350  5.9999999999999994e-96  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  96.11 
 
 
180 aa  338  2.9999999999999998e-92  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_009428  Rsph17025_2905  putative anti-sigma regulatory factor, serine/threonine protein kinase  55.15 
 
 
149 aa  129  2.0000000000000002e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.94653  normal  0.27326 
 
 
-
 
NC_007802  Jann_4052  putative anti-sigma regulatory factor (serine/threonine protein kinase)  37.5 
 
 
170 aa  81.6  0.000000000000005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.45 
 
 
146 aa  72.8  0.000000000002  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_009952  Dshi_0072  serine-protein kinase  40.15 
 
 
169 aa  64.3  0.0000000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00642578 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  32.38 
 
 
570 aa  61.2  0.000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.36 
 
 
147 aa  54.3  0.0000009  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.44 
 
 
147 aa  53.1  0.000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.53 
 
 
138 aa  52.8  0.000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_008686  Pden_0819  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.07 
 
 
185 aa  52.8  0.000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0063  putative anti-sigma regulatory factor (serine/threonine protein kinase)  26.36 
 
 
140 aa  48.5  0.00005  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0713993 
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.31 
 
 
139 aa  48.1  0.00007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4135  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.28 
 
 
188 aa  47.4  0.0001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  35 
 
 
137 aa  47  0.0002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  26.6 
 
 
160 aa  46.2  0.0002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  26.6 
 
 
160 aa  45.4  0.0005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  26.6 
 
 
160 aa  45.4  0.0005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  26.6 
 
 
160 aa  45.4  0.0005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1525  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.33 
 
 
141 aa  45.1  0.0006  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  26.6 
 
 
160 aa  45.1  0.0006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  23.01 
 
 
159 aa  44.7  0.0008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  23.01 
 
 
159 aa  44.7  0.0008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  26.6 
 
 
160 aa  44.7  0.0008  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  26.6 
 
 
160 aa  44.3  0.0009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  26.6 
 
 
160 aa  44.3  0.0009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  25.53 
 
 
160 aa  44.3  0.0009  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_013216  Dtox_0933  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.67 
 
 
142 aa  44.3  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0815302  normal  0.189071 
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.26 
 
 
286 aa  43.9  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2444  multi-sensor signal transduction histidine kinase  31.37 
 
 
721 aa  43.5  0.002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0911916  normal  0.976086 
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  25.53 
 
 
160 aa  43.5  0.002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3686  multi-sensor signal transduction histidine kinase  35.29 
 
 
709 aa  42.7  0.003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.206553 
 
 
-
 
NC_013223  Dret_0547  PAS/PAC sensor signal transduction histidine kinase  26.85 
 
 
731 aa  42.7  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  27.55 
 
 
162 aa  42.7  0.003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_0750  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.04 
 
 
141 aa  42  0.004  Geobacter lovleyi SZ  Bacteria  normal  0.194451  n/a   
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
147 aa  42.4  0.004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_4032  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.62 
 
 
155 aa  42  0.005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2397  signal transduction histidine kinase  36.99 
 
 
493 aa  42  0.005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.62445  hitchhiker  0.00117344 
 
 
-
 
NC_014248  Aazo_1701  putative anti-sigma regulatory factor serine/threonine protein kinase  28.05 
 
 
140 aa  42  0.005  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1826  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.21 
 
 
147 aa  41.6  0.006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3443  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  33.7 
 
 
147 aa  41.2  0.007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0106512  normal 
 
 
-
 
NC_013204  Elen_2936  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.82 
 
 
140 aa  41.2  0.008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0863  putative anti-sigma regulatory factor  24.24 
 
 
143 aa  41.2  0.009  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.286315 
 
 
-
 
NC_007512  Plut_1040  putative anti-sigma regulatory factor (serine/threonine protein kinase)  24.24 
 
 
143 aa  40.8  0.01  Chlorobium luteolum DSM 273  Bacteria  normal  0.469899  normal  0.536702 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>