| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0547 |
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| Symbol | |
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| ID | 8418357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 656921 |
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| End bp | 659116 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037113 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003197422 |
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| Protein GI | 258404680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAG ACCCTATCCG CATCAGCGGC CCGGATACGC GGGAACGGCG CCGCCGGCAA
CGAGAACTGC TGTTGGCGGC CGGGGCTGTC GGCCTGATCG TCCTTCTGAC CTGGATTGAG
CTCCAGTTTT TCGGTGTCAA TTCCTACCTT TTTCTCGCCT TTTTCAATCT CAATCTCATC
TTATTGCTGC TGATCCTGTT TCTTGTGTTG CGAAACGGGG TCAAACTGCT GCTTGAGCGG
CGACGACGAG TCCTCGGCGC CAGATTGCGC ACACGTCTGG TGCTCGCCTT CATGTCCTTG
TCCCTTATCC CGACCATCCT CATGTTTCTG GTGGCGGTGC GTTTCGTGCA GACCTCTGTG
GATTTCTGGT TCAAAAGCCA GATCGAAAGT TCCCTGGACC AGGCCGTCAA GGTTGGCCAA
GGATACTACC GTCAAATGCA GAACCAATTG GAAACACAAG GGGTATTCAT TCTGGAGTCG
ATCCGGCGCC GGGAATTTGC CTGGGGCGGG GAAGGCATGG ATGATTTCCT GAAATTCAAG
CGCCATGAAT ACGGTCTGTC GTTGGTCGGC GTCCTGCAGG ATGATTTGCA ACAACAAAAT
TGGCACGGCT CCGAAAATTG GGAACAGTCG TGGTCCGCGT TTGAAGACTC GGTCGATTGG
GAGACGTTGC GCCAAAATCC CCGATTCTGG TCCGGGATGC GACCCGGCCC GGAGGCCGAT
CTGGTGGTGG GAATCGTGCC GGTGGACGAA GCCAAGACCG GTTTTCTCGT TGTCGGCCGG
AGTATGGAAA AGGGGCTATT GCGGCAGTTG GACAATATCA TCCAGGGCAT GGACGAGTAC
AAGCAACTGA AAACCCTCAA ATTCCCCCTG AAGGTGGCCC TGTACCTCAT CCTGGCGGTC
ATGACCCTGC TGATTCTTCT GGGGGCGATG TGGTTCGGTT TTCGGCTGGC CAAGGAGATT
TCCGCTCCGG TCCAGGCCCT GGCCGTGGGC ACGCAACGCA TTGCCCGCGG TGACCTCAGT
GTTCGCCTTG AGGACCAATC TTCAGATGAG ATCGGGCTTT TAGTCCAATC GTTCAACAAG
ATGGCCGGTG ACCTGGAGCA GAGTCAGGAC CGGTTGCGGC TGGCCAATGA CCGCTTGGCG
CGGCAAAACC GCGAACTCGA AGAGCGGGGC CGGTATATGG AAGCCGTGCT GAACAACATC
ACGGCCGGGG TCATCTCCCT GGACAGTCAT GGGCAGATCA ACACGGTCAA TGCCGCGGCG
GAGACCATTT TAGGGACTGC AGCGGAGCAG TTGGTGGGGC AAAATCCCCT GGAATTGCTC
CAGGGCGAGC AGGCCGAGTT GGTGCAGGAA ATGCTCAGTC AGCTGACCCA GGCGCCCCAT
TCCCAATGGC AGCGGCAGCT TGATCTGGAA TTGGGTGGCC AGGTGCGCAA GCTGTTGGTC
AATGCTGTGG TCCTGCAAAC AGGTGAAGGG GAACGGGCCG GATTGGTGGC GGTGTTCGAA
GATGTGACCG AGCTGGACAA GATGCAGCGC ATGGCCGCCT GGCGCGAAGT GGCCCGGCGT
ATCGCGCATG AAATCAAGAA CCCCCTGACC CCGATCAAGC TCTCGGCCCA GCGCCTGCAG
CGGAAATTCG GTGACCAGGT TCAAGACGGG GTCTTCACCC AATCCACGGA ATTGATAATC
CGGCAGGTCG AGCATCTGCA ACAGATGGTC TCCGAGTTCT CGGCCTTCGC CAAGTTGCCG
GAAGTGCACC CGAAGCGAGA CGAGATCACC CCGCTCGTCC AGGAGGTGGT GGCGCTTTTT
CGCCAAAGTC ACAATACCAT CCAGTGGACA GTGGAGGAGC AGGACGAGAC CCCTCCTTTC
CGTTTCGATC GCGAGGCGAT CAAGCGTGTT TTGATGAACC TGCTGACCAA CGCGGCTGAG
GCCCTTCAAG GCGGCAACGG CTCAACAGTG GACATCAGTG TCGATTGCGA TGTCAGCAGC
GGATGGGTCC GTTTGCAGAT CGCGGACAAT GGGCCGGGAC TTTCGCCAGA AGAACGTTCG
CGTCTGTTTG AACCCTATTT TTCCCGCAAG AAAGGGGGCA CCGGCCTGGG GCTGACGATC
GTCAAATCCT TGGTCAACGA CCATCACGGC TATGTTCGCA TCAAACCCAA TTCCCCACAC
GGCAGCGTCT TCGTGGTTGA ACTGCCGCTT GTCTGA
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| Protein sequence | MAQDPIRISG PDTRERRRRQ RELLLAAGAV GLIVLLTWIE LQFFGVNSYL FLAFFNLNLI
LLLLILFLVL RNGVKLLLER RRRVLGARLR TRLVLAFMSL SLIPTILMFL VAVRFVQTSV
DFWFKSQIES SLDQAVKVGQ GYYRQMQNQL ETQGVFILES IRRREFAWGG EGMDDFLKFK
RHEYGLSLVG VLQDDLQQQN WHGSENWEQS WSAFEDSVDW ETLRQNPRFW SGMRPGPEAD
LVVGIVPVDE AKTGFLVVGR SMEKGLLRQL DNIIQGMDEY KQLKTLKFPL KVALYLILAV
MTLLILLGAM WFGFRLAKEI SAPVQALAVG TQRIARGDLS VRLEDQSSDE IGLLVQSFNK
MAGDLEQSQD RLRLANDRLA RQNRELEERG RYMEAVLNNI TAGVISLDSH GQINTVNAAA
ETILGTAAEQ LVGQNPLELL QGEQAELVQE MLSQLTQAPH SQWQRQLDLE LGGQVRKLLV
NAVVLQTGEG ERAGLVAVFE DVTELDKMQR MAAWREVARR IAHEIKNPLT PIKLSAQRLQ
RKFGDQVQDG VFTQSTELII RQVEHLQQMV SEFSAFAKLP EVHPKRDEIT PLVQEVVALF
RQSHNTIQWT VEEQDETPPF RFDREAIKRV LMNLLTNAAE ALQGGNGSTV DISVDCDVSS
GWVRLQIADN GPGLSPEERS RLFEPYFSRK KGGTGLGLTI VKSLVNDHHG YVRIKPNSPH
GSVFVVELPL V
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