7 homologs were found in PanDaTox collection
for query gene RPD_0022 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_0022  hypothetical protein  100 
 
 
196 aa  396  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.842797  normal 
 
 
-
 
NC_007958  RPD_0019  hypothetical protein  58.38 
 
 
203 aa  225  4e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1360  hypothetical protein  60.54 
 
 
195 aa  221  4e-57  Nitrobacter hamburgensis X14  Bacteria  normal  0.948629  n/a   
 
 
-
 
NC_007964  Nham_1980  hypothetical protein  52.08 
 
 
219 aa  188  4e-47  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3655  hypothetical protein  46.84 
 
 
196 aa  137  1e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3652  hypothetical protein  32.45 
 
 
201 aa  107  9.000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1864  hypothetical protein  31.66 
 
 
230 aa  79.7  0.00000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
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