20 homologs were found in PanDaTox collection
for query gene EcSMS35_0280 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_0280  lateral flagellar hook length control protein LafE  100 
 
 
353 aa  693  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.00112639  normal  0.832846 
 
 
-
 
NC_010468  EcolC_3354  flagellar hook-length control protein  97.45 
 
 
353 aa  630  1e-179  Escherichia coli ATCC 8739  Bacteria  normal  0.26505  normal 
 
 
-
 
NC_010159  YpAngola_A0204  flagellar hook-length control protein  37.74 
 
 
361 aa  93.6  5e-18  Yersinia pestis Angola  Bacteria  normal  normal  0.504865 
 
 
-
 
NC_009439  Pmen_0189  flagellar hook-length control protein  48.31 
 
 
352 aa  92.4  1e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.511537  normal 
 
 
-
 
NC_009708  YpsIP31758_0658  flagellar hook-length control protein  41.01 
 
 
365 aa  88.2  2e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001169  flagellar hook-length control protein FliK  35.46 
 
 
357 aa  79  1e-13  Vibrio sp. Ex25  Bacteria  normal  0.272814  n/a   
 
 
-
 
NC_009784  VIBHAR_04953  flagellar hook-length control protein  37.39 
 
 
351 aa  77  5e-13  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_3583  flagellar hook-length control protein  33.93 
 
 
334 aa  74.3  3e-12  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0231  flagellar hook-length control protein, putative  36.45 
 
 
380 aa  66.2  7e-10  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0179  flagellar hook-length control protein, putative  37.65 
 
 
381 aa  63.2  6e-09  Burkholderia thailandensis E264  Bacteria  normal  0.501207  n/a   
 
 
-
 
NC_007954  Sden_3635  flagellar hook-length control protein  32.8 
 
 
438 aa  63.2  6e-09  Shewanella denitrificans OS217  Bacteria  normal  0.225852  n/a   
 
 
-
 
NC_009901  Spea_0059  flagellar hook-length control protein  37.21 
 
 
390 aa  58.5  1e-07  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4663  flagellar hook-length control protein  31.93 
 
 
390 aa  56.6  6e-07  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.180097 
 
 
-
 
NC_009052  Sbal_3952  flagellar hook-length control protein  26.27 
 
 
395 aa  55.1  2e-06  Shewanella baltica OS155  Bacteria  normal  0.253491  n/a   
 
 
-
 
NC_009831  Ssed_0053  hypothetical protein  31.46 
 
 
383 aa  53.5  5e-06  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2354  flagellar hook-length control protein  34.34 
 
 
487 aa  52.4  1e-05  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3451  flagellar hook-length control protein  28.57 
 
 
393 aa  48.9  0.0001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1964  Flagellar hook-length control protein-like protein  29.71 
 
 
324 aa  48.1  0.0003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.727762  n/a   
 
 
-
 
NC_009664  Krad_1656  flagellar hook-length control protein  33.33 
 
 
663 aa  47.4  0.0004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.410936  normal  0.453222 
 
 
-
 
NC_012918  GM21_3916  flagellar hook-length control protein  26.05 
 
 
656 aa  43.5  0.006  Geobacter sp. M21  Bacteria  n/a    normal  0.108844 
 
 
-
 
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