| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0280 |
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| Symbol | lafE |
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| ID | 6145868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 290393 |
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| End bp | 291454 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641615178 |
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| Product | lateral flagellar hook length control protein LafE |
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| Protein accession | YP_001742387 |
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| Protein GI | 170682509 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | [TIGR02514] type III secretion system needle length determinant |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00112639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.832846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG CATTGCTTGC CACGCTCGGA ACACTTGCGG AAACGGCGTC GCTGAAAGCG
GATATTTTAC CGCCGGTGAG TAGTGAAAAC GCGCCCGCGT TTACCCTGCC GAAAATGGCG
GTCGCGGCGG TGGCGGAGCG CGTTCATAGC GCAAAAACCA GTCAGCAACA GGCGACGCGC
CCGCAGGAGA ACGATCCGGT GGCGATGCAG GCGCTAATGG CGCTGTTACT TCCGCAACCT
GCCGCGCCGC ATCAGGACAC GCCGCAGCCG CGAAACGTCG CAACATCGCC GGTTATCCAG
CAATTGACGA AAGCGGTGGT GCAAAACGCG GCGCAACGCC CGACGCAGCA GCAGGAACTC
ACGCCGTTGC CGCCGCAGTT GCAGGAGCTG ATCAGTCAGT TGCCGCAGGC GAAACCCGAA
CAGCAGGCCA GACTGGCGAC TTACGCCAGT GAAGATTTAC ATGCCATTGC ACCGACGCAG
CCGCGCGTCT CAACACAGCC AGCTCGCCCG AAACCTGAAC TAACCCGTGT GAACGCGCGC
CCGCAGGTCG AGCGTAAAAC GGAAAAAGTG CCGGACAGCG AACCGGTTAT TGCGCGTGCG
GTGTTGCAGG TTAAGACGCC GGATCTGGTC AGCGAACATC AGGAGATTGT CGCCAAACCA
GCCACGCTTT CGATGGACGA ACTGGGCGAA AAACTGACGA CGCTGTTGAA AGATCAGATC
CACTTTCAGC TCAACAAACA ACAGCAGATC TCCACCATCC GTCTCGATCC ACCGTCGCTT
GGCAAGCTCG AGATCGCCGT ACAACTCGAC AACGGCAAAC TGATGGTGCA CATCGGCGCG
AACCAAAGTG AAGTTTGCCG CGCGTTACAG CAGTTTAGCG ACGATCTCCG CCAGCATCTG
ACGGCGCAAA ATTTTATGGA GGTGAACGTA CAGGTCTCCT CCGAAGGGCA GTCGCAACAG
CAACAACAGT CGGGCCATCA GCAGGAAGAG GTGAGTGCCG CCTTACAGCT TGATGATGCG
CCTCAATTTC AACAGAACGA ATCCGTTTTG ATCAAAGTGT AA
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| Protein sequence | MNPALLATLG TLAETASLKA DILPPVSSEN APAFTLPKMA VAAVAERVHS AKTSQQQATR
PQENDPVAMQ ALMALLLPQP AAPHQDTPQP RNVATSPVIQ QLTKAVVQNA AQRPTQQQEL
TPLPPQLQEL ISQLPQAKPE QQARLATYAS EDLHAIAPTQ PRVSTQPARP KPELTRVNAR
PQVERKTEKV PDSEPVIARA VLQVKTPDLV SEHQEIVAKP ATLSMDELGE KLTTLLKDQI
HFQLNKQQQI STIRLDPPSL GKLEIAVQLD NGKLMVHIGA NQSEVCRALQ QFSDDLRQHL
TAQNFMEVNV QVSSEGQSQQ QQQSGHQQEE VSAALQLDDA PQFQQNESVL IKV
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