15 homologs were found in PanDaTox collection
for query gene Amir_6164 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6164  glycoside hydrolase family 5  100 
 
 
612 aa  1230    Actinosynnema mirum DSM 43827  Bacteria  normal  0.791591  n/a   
 
 
-
 
NC_013595  Sros_5302  hypothetical protein  47.69 
 
 
632 aa  490  1e-137  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00149118  normal 
 
 
-
 
NC_013510  Tcur_1364  glycoside hydrolase family 5  49.82 
 
 
618 aa  466  9.999999999999999e-131  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00194405  n/a   
 
 
-
 
NC_008699  Noca_3558  endoglycoceramidase  30.59 
 
 
490 aa  95.5  2e-18  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0664  glycoside hydrolase family 5  26.21 
 
 
470 aa  85.5  0.000000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.253285 
 
 
-
 
NC_013595  Sros_1713  glycoside hydrolase family protein  29.58 
 
 
472 aa  80.5  0.00000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.217477 
 
 
-
 
NC_012669  Bcav_2260  glycoside hydrolase family 5  36.24 
 
 
410 aa  77.8  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.445359  normal 
 
 
-
 
NC_009719  Plav_0833  hypothetical protein  28.91 
 
 
656 aa  75.9  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.982432  normal 
 
 
-
 
NC_009042  PICST_55209  predicted protein  26.07 
 
 
912 aa  74.3  0.000000000005  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_006693  CNH02490  cytoplasm protein, putative  28.21 
 
 
851 aa  73.9  0.000000000009  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006670  CNA06030  cytoplasm protein, putative  26.24 
 
 
742 aa  69.3  0.0000000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.749015  n/a   
 
 
-
 
BN001306  ANIA_03013  glycosyl hydrolase, putative (AFU_orthologue; AFUA_3G08820)  26.15 
 
 
763 aa  62.8  0.00000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_008061  Bcen_5206  glycoside hydrolase family protein  25.97 
 
 
553 aa  56.2  0.000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.253105  n/a   
 
 
-
 
NC_008543  Bcen2424_5653  glycoside hydrolase family protein  25.97 
 
 
553 aa  56.2  0.000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.227096  normal  0.196553 
 
 
-
 
NC_009012  Cthe_0797  glycoside hydrolase family protein  29.87 
 
 
814 aa  45.4  0.003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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