Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA06030 |
Symbol | |
ID | 3253791 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 1611909 |
End bp | 1614956 |
Gene Length | 3048 bp |
Protein Length | 742 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252924 |
Product | cytoplasm protein, putative |
Protein accession | XP_566957 |
Protein GI | 58259089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.749015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCAACTCCAC TCTGCTTAGC GTATTACTCT GTTCCCACAC CCACCAGCAT GTCCGATCCT CAATTTGACA TATCCCACCT ATCTGCAGCT GCAATTTCCA TAGAAGGCAG GCATTTTATC GACTCGCACG GGAGAGTCTT ACACCTGCGG GGTGCCAACG TTTCCGCTGC AAGCAAAGTG TGAGTCCGCG TGCATCATTG TTTCTTATGA ACGCGTTGCT CTTTGTTGCT CCTCCAAAAG TTGTTAATCG TCCATGTTAT GGGTAGACCT GCGTTCCCTG CGCCTAAAAT TCACGATCAT GCGCAGGCCA ATTATGTCGG AAGGCCGTTC CCGCTGGAGG AGGCTGATGA GCATTGGGCG AGGCTCAAAT CATGGGGTTT GACATTTGGT ACGTTACTGA TTTGGAGGCA TTATACAATC GCTGAACTAT GTTCGTATTC CTAGTCAGGT TAACCGTAAC TTGGGAAGCG CTCGAACACA AGGAAAGGTG AGATCCTAAT TTCAGCCGGC CGAGTCGTTT CTAAATGAAA TCTAGAGGTG TCTATGACGA AGATTATCTT GCGTACTTGA GGGCGTTGCT TCAAAGCATG GAGCCTTATG GGCTCGTCGC ATACATTGTA GGTGCCATAC GTCTCTCAAG GCAAATACTC ACCATGCCTT GTATCTGTTT AGGCTCTTCA TCAAGATGTA TGGTCAAGAT ACTGCGGAGG AGTAAGATTC TGGCGTTACA GTATTAATCT TCTCGTATTT CTGACATGAT TTCAGTCTGG GGCACCCGGA TGGACGCTAG AAGCGGCGGG GTTTGACCTT TCAAATGAGG GCGAGAATTT GTCCTTGTCT GGTGCCGCCT TCCTTGACGG CATCAAGAGT GGAAGGCTCG CAGGAGAGAG GGGCTTATGG CCAACTGGTG GGTACATCCT CCAATGACTT GCCAAGTCAT CGTTGATATG TTATCTATAG GCTACCAAAA GCTGGCTGCG GCTACTATGA AGTAAGTTAT TTGTTATATA ACACTCAAAG GCCCATATTG AAAAGTTATA GTACTTTATT TTGGGGTGGA GAGACGTTTG CGCCTTCGCT CAGAGTATCC GCCCAAAATG ATGGGAAATG GGTGTCTCGC AACATCCAGG TATACTTACA AGACGCCTTC CTTGCTGCTA CCGCCAAGCT TGTGAAGGCC GTAGGTGATC TTGAGACAGT CGTCGGTTTT GAAGTAAGGC AAAATTGTTT CACTTGTGCA TATTTGACTG ACCATCGTGC GTAGCTTATG AACGAACCCC ATCCTGGGTT CATTGGTATC CAATCTATTC ACGAATGGGT CCGTCTGACA GTCGAAAGTT ACCAATTGTA GCTGACAGCA GCGAACAGGA CTATACTACT GATCTTCATT TGGGTCAATT CCCCTCTCCG CTTCAATCAT TCTCTATGGG TGCCGGCCAC CCCACTCCCA ATGTACCTGT TTATACTCGT TCTTTCCCTT TCCCAACCCG TATAACATCT CACGTGACGG CCAACCCTGA AGGAGCTTGC GCCTGGGCAA GTAAGGAATG CCCTTGGGAG AAGCATGGTG TTTGGCGGTG GAGTGAAGCA AGGCAGGAGG CTGCTGCTTT GCAGCAAGAC TACTTTGTAA AGAACCGGGA TGGAGGCAAG GTTGATTTTT ACGAAGACTT TTATTTCCCA TTTGTGAGAA AGTGGGAGCA AGTGGTCGAA GAGAATACTT CCTCAACCAA GGGATTGAAA GCCAGAATGG TGGAAGCAAT TCCCAACGAG CTTTGCCCAG AGTGGAAAGA GGAGTCGCGG CCCAAGAATA TGGTCTATGC GCCTCATTGG TATGATCTAA ACACATTGTT CAAGAAGAAG TTTGGGTTCA TGTCAGTTAA TGTTCAAGGC CTTGCTCGGG TGCGTACAAC TTAGTTTATT ACGGAGATAC AGCTGATACC TTCTGTCAGG GCATGTTTAT TCTTCGAGCG CTGTATTTTG GCACTGCTGC CGCCAAAGCC AATTATGCTC TTCAGATAAA GACCATCGTC CTTGCTGCTC GACTTAAACT TGGGCCCGTA CCTGTGATCT TTGGTGAATG CGGTGTTCCC ATGGACATCA AGTAAATGAT TCTTCCACCG TTTGCGAAAC TTCGAATGTT AGCTGATTAA TGCCATAGCA ATGAGGAAGC CTTTAGGACG GGAGACTGGA AATGGCAAGA ACGGTCTATG GATGCTGTTA TTTCTGCGAT GGAAGGCGCA TTAATGGGAT TCAAGTAAGT AGTTCTGTGC ATCATAACGT AAGGGCGGCT AACGATACAC AGTTTGTGGA CCTACAATCC TGCCAATCGC GACGATATTG GTGATGATGT GAGTCTCTTT TCTGCCTGAA TTTTAAATGG AAATGCTAAT ATTATTCAGT GGAATGCGGA GAATTTTTCC TGGTATTCAG AAAGTAATCG CACCAAGCTC CTTCAGGATG CCGAAAAAAG CTCCGACTGT CTTGACGTTG GAGCTCGTCT GTTGAATGTT ATTGTTGTCA GTCTCTTTTA TAGTTCTCAT CTAACCGAAA AGCTAACTTA TAGGCAGCGC CCTTACCCGA TCGCCACCGC TGGTAACCCA ACTTCTCTTG CTTACGACGC AAACGCTTGT ACTTTTACAT ATCGTTTCCG ATCTCCTTTG AGGGTGTCAA CCGCGGCTCC CACTCCCGAA GAATACACCG AGATCTTCCT TCCTCGTCGC GTATTCCGAA AAGAGTCCAC AGAATGGACA GTCACAGCTG GGGGCAAAGT CCATGTTGAC TGGGAGAAAG AGCGAGCATT CGTGTGGTTC GAGGACTCAA GTTTGACGGC AGCAAGCATC AAGGAAGACA CGAGGTCGCG CCGAATCGAT ATTTGGGTAA CAGGCCAAAA GGTAGAGGAA AGTTGGTCCA CTGCACAAAT CCTGGTGACA GTGGCGATCT TGCTGCTGGG TGTGCTGGTG GCATATTACG CACAGCTCTA CGAATGGGAG AAAGATAAGA CGATCTTCCA ACACCTGAGG GAGACCAATG GAATGTAGAT TTTCATAC
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Protein sequence | MSDPQFDISH LSAAAISIEG RHFIDSHGRV LHLRGANVSA ASKVPAFPAP KIHDHAQANY VGRPFPLEEA DEHWARLKSW GLTFVRLTVT WEALEHKERG VYDEDYLAYL RALLQSMEPY GLVAYIALHQ DVWSRYCGGS GAPGWTLEAA GFDLSNEGEN LSLSGAAFLD GIKSGRLAGE RGLWPTGYQK LAAATMNTLF WGGETFAPSL RVSAQNDGKW VSRNIQVYLQ DAFLAATAKL VKAVGDLETV VGFELMNEPH PGFIGIQSIH EWDYTTDLHL GQFPSPLQSF SMGAGHPTPN VPVYTRSFPF PTRITSHVTA NPEGACAWAS KECPWEKHGV WRWSEARQEA AALQQDYFVK NRDGGKVDFY EDFYFPFVRK WEQVVEENTS STKGLKARMV EAIPNELCPE WKEESRPKNM VYAPHWYDLN TLFKKKFGFM SVNVQGLARG MFILRALYFG TAAAKANYAL QIKTIVLAAR LKLGPVPVIF GECGVPMDIN NEEAFRTGDW KWQERSMDAV ISAMEGALMG FNLWTYNPAN RDDIGDDWNA ENFSWYSESN RTKLLQDAEK SSDCLDVGAR LLNVIVRPYP IATAGNPTSL AYDANACTFT YRFRSPLRVS TAAPTPEEYT EIFLPRRVFR KESTEWTVTA GGKVHVDWEK ERAFVWFEDS SLTAASIKED TRSRRIDIWV TGQKVEESWS TAQILVTVAI LLLGVLVAYY AQLYEWEKDK TIFQHLRETN GM
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