34 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Maeo_0002  CDS  NC_009635  1476  2579  1104  hypothetical protein  YP_001324207  decreased coverage  1.0754e-05  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0054  CDS  NC_009635  61344  62438  1095  glycosyl transferase group 1  YP_001324258  decreased coverage  2.26756e-07  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0130  CDS  NC_009635  145074  146009  936  hypothetical protein  YP_001324334  decreased coverage  0.000577479  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0131  CDS  NC_009635  146095  148521  2427  Hef nuclease  YP_001324335  decreased coverage  0.00335055  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0145  CDS  NC_009635  163518  163820  303  cobalt transport protein CbiN  YP_001324349  decreased coverage  0.00778017  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0197  CDS  NC_009635  212509  213273  765  TatD-related deoxyribonuclease  YP_001324401  decreased coverage  0.00720719  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0258  CDS  NC_009635  285249  285893  645  flagellin protein  YP_001324459  decreased coverage  0.00883872  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0273  CDS  NC_009635  299392  299733  342  hypothetical protein  YP_001324474  decreased coverage  1.38863e-07  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0274  CDS  NC_009635  299826  300209  384  hypothetical protein  YP_001324475  decreased coverage  1.37219e-06  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0409  CDS  NC_009635  426877  427794  918  hypothetical protein  YP_001324607  decreased coverage  9.22496e-06  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0410  CDS  NC_009635  427794  429773  1980  hypothetical protein  YP_001324608  decreased coverage  8.46303e-05  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0441  CDS  NC_009635  461420  462394  975  N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase  YP_001324639  decreased coverage  1.24478e-07  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0442  CDS  NC_009635  462679  463203  525  beta-lactamase domain-containing protein  YP_001324640  decreased coverage  1.84233e-07  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0447  CDS  NC_009635  470084  470614  531  hypothetical protein  YP_001324645  decreased coverage  1.25773e-06  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0519  CDS  NC_009635  539528  540631  1104  hypothetical protein  YP_001324717  decreased coverage  0.00443458  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0657  CDS  NC_009635  677249  677872  624  beta-lactamase domain-containing protein  YP_001324853  decreased coverage  1.8109e-05  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0711  CDS  NC_009635  727844  730828  2985  SMC domain-containing protein  YP_001324906  decreased coverage  0.00173757  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0731  CDS  NC_009635  749038  749628  591  hypothetical protein  YP_001324926  decreased coverage  0.000783321  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0732  CDS  NC_009635  749644  750840  1197  hypothetical protein  YP_001324927  decreased coverage  0.0056703  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0765  CDS  NC_009635  788078  788860  783  hypothetical protein  YP_001324960  decreased coverage  0.00647817  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0814  CDS  NC_009635  842240  842434  195  hypothetical protein  YP_001325009  decreased coverage  0.000613584  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0837  CDS  NC_009635  866501  867082  582  putative deoxyribonucleotide triphosphate pyrophosphatase  YP_001325031  decreased coverage  4.74937e-05  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_0840  CDS  NC_009635  868368  869000  633  methyltransferase type 11  YP_001325034  decreased coverage  4.5318e-05  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1057  CDS  NC_009635  1092069  1092647  579  hypothetical protein  YP_001325247  decreased coverage  0.00992508  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1159  CDS  NC_009635  1216821  1217666  846  hypothetical protein  YP_001325348  decreased coverage  3.76002e-06  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1160  CDS  NC_009635  1217750  1218949  1200  tRNA pseudouridine synthase D  YP_001325349  decreased coverage  3.00328e-06  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1373  CDS  NC_009635  1435875  1436651  777  dihydroorotate dehydrogenase electron transfer subunit  YP_001325561  decreased coverage  0.000750144  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1374  CDS  NC_009635  1436769  1438667  1899  hypothetical protein  YP_001325562  decreased coverage  0.00571338  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1375  CDS  NC_009635  1438783  1439376  594  hypothetical protein  YP_001325563  decreased coverage  0.000270637  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1376  CDS  NC_009635  1439378  1440817  1440  cysteinyl-tRNA synthetase  YP_001325564  decreased coverage  0.0031117  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1447  CDS  NC_009635  1503741  1504919  1179  hypothetical protein  YP_001325635  decreased coverage  0.00032222  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1448  CDS  NC_009635  1505400  1506923  1524  thiamine pyrophosphate binding domain-containing protein  YP_001325636  decreased coverage  0.000936916  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_1449  CDS  NC_009635  1506984  1507850  867  DNA topoisomerase type IA Zn finger domain-containing protein  YP_001325637  decreased coverage  0.000162485  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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Maeo_R0005  tRNA  NC_009635  766012  766087  76  tRNA-Met    decreased coverage  0.00673083  n/a    Methanococcus aeolicus Nankai-3  Archaea 
 
 
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