Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0711 |
Symbol | |
ID | 5327610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 727844 |
End bp | 730828 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640788100 |
Product | SMC domain-containing protein |
Protein accession | YP_001324906 |
Protein GI | 150401140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00173757 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATAA AAAATATTAA TATTAAAAAT TTTAGGAGCC ATAGTAATAC CGACATATCA TTTAAACAGG GAATTACCAC AATAATAGGA GAAAATGGAA GTGGAAAATC ATCTATATTT GAAGCTATGA ATTACGCCTT ATTTGCACCT CGTAGAATTA AATTGAGTGA TGCAATAAAA AGAGGCACCG ATTTTTTTTC AATATCGTTT GAATTTGAAA TAAATGGTAA AAGATATAAA GTTATTAGGG GCAGGGGCAA GAAAAATATA AATTATCTTT ACGAAAATGA TAAACCATAT TCTGAAAACA ACGATGAAGT CAATAATAAA ATAAAGGAAA TACTCAATAT GGACGACGAG GTATTTTCAA ATGCCATATA TATAAAACAG GGAGATATAT CTTCACTTAT TCAAATTACG CCCGCGGAAA GAAAAAAATT AATAGGAAAA TTATTGGGTA TTGAAAGATA TGAGCAAGTA TGGGACAAAC TCAAAACACC ATTAAAAAAT ATGGAATTAG ATTTAAAAAA GATTGAAGGG GAATTAATAC AAAAAGAGGA CATAAATACC AATATAAATA ATTTAAAAGA AAATATGGAA AAAAATTCAA AAATTTTAAA GGAGCTCCAA GATAAATTTA ATCATGCTGT GGAGCTCCGA GACAGGAAGG AAAAATTGCT AAAAAAATGG GAAAAAAAGG AAATAGAAAA TAATAATTTA CAAAATAATT TAAAAGAATT AAAATATGGG GTCGAAACTT CTGAAAATAA TATTAAAATT TTAATAAGTG ATTTGGGAGC CATAAATACC CACAATAATA TTTTAAATAG TAACTATTTA AATTACTCCA AATACAAGGA AATAGAAAAT AAATTAAAAA AGTTGGCAAA TGAACTATTG CAATACAAAA AATATTACGA TAAATTCAAT GAGTTAAATG GGGAAATGAA AGGTTTAGAA AAAACCATTA AAGAAATCGA TAAAAAATTA ATTGATAAAA ATCCAAAAAA TAAATCAAAT AGTGAAATAG AACAGGAAAT TAATGATATA AACAAAGAAT TAAATAAATT AGATGATATA TTAAATAAAT TAAAAGATTT GGAATTATTA AATAAAGAAC TGACTAAAAT TGAAAACAGT AAAAAGGAAT TAAATAAAAA TAAAGAAAAT TATTTAAAAT ATTTGGAATT GTCAAAGAAA TCCAAGGAAT TAAATAATAA ATTAATGGAA TTAAGCGGAA TAAAAGAAAA GGAAAACGAC TTAAAACAAC AAATTAAATC TACTGAATAT AAAATAAAAC AACTTAAACA GGATTTAAAA GATTTTAATA ATATTGATAT AGAGATAAAT AAGGAAAAAG AAATTAAAAC AAAATATGAG GATATTGTTA ATAAAATAGA CCTGTTAAAA GAGAAAATAG CACAAAATAA TGCAGAAATA AACCAAACAA AAGACGCCAT AGAAAAACTT AAAGGAACAA CAGAGGATAA ATGTCCAGTA TGTCAATCAA ATATTGATGG GTTGAAAAAA CAGGAGCTCC TAAAACAATA CAATCAATTA ATAGAGGAAA GAAAACAAAA ATCAAATAAA CTACAAATAA AATATAACAA ATATTTATCT GAAAAAAAAG ACATAAAGGA CAAATTAGAT AAAATAAATA ATTTAAAAAA TAAATATGGA CAATTAAAAG AAAAAAACAA TAATTTAATA GAAGAAGAAA ATAAATTAAT TAAGTTAAAT AATGATTTAA ATGTTATTGG AAAAGATTTA GAAGAATATA ACAAAATAAT AGAAAATATT AAAACAAAAG AAAATAAATT AAAAGAATTA GAACAATATT ATAAAAAATA TGAATACTGT GAGAATTTTT TAAAAGATAG CAATGAGCAG GAACTGGTAG ACAATAAAAA CAAATTATTA GATATAATTG GAAACAATAC AAATAAATCC ATATTAAATA CAAAAAAAGA GTTAAATAAT AAGGTAGGGG AATTAAATGA GCTGTTAAAT TTAATTAGAA ATAAAGAACA AAACATGAAA AAATTAAATG TCGTAAATAA AGAAATAGAT AATTTAAAAG ATAAGGTTGC AACGAATTCC CAATTAGAAA TTGAAAAAAA CAGCAACGAA AAAGAGCTAA TAAAATATAA AGACGGATAT AATCAATATA ATGATTCTTA TGCAGTGTTA AAGAATTATG CCGATAAATA TGCCGTATCT ATTGAAGAAA TAAGAAATAA AGTTAATGAG TTATTGAAAA AAGAAAACAA TAATTTAAAC AATTTAAACA ACGAAATACA AAATATTAAA TTATCAATTG AAAAACTACA ATACAATATA GAGGAATTTG AAGATATTAA AAAGGATTAT AATAAAATAA ATAACAAAGT TAATGAAATT AATGAGGATA TTATTAAATT AGATACAACA ATTAAAAATG AAAATAAATT ATTATCTGAA TTTGAAAATA AATTAAAACA ATTGGAAAAA TTAGAATCTA AAAAGGAACA GCTAAACAAT GCTATACATA ATTTAGCTAA CATAAGAGAA GCCGTTTTCT CAAAAAATGG ATTTCAACAA TATTTAAGGC AAAAATATAT ACCTATTATT CAAAGACATA CCAATGAAGT ATTTAATGAA TTTGAATTAC CATATAGCCA CATAGAAATT AAAAATGATT ATGATATTAC AGTAGATGAT AATCCAGTAA AGACGCTAAG TGGAGGGGAG CAAATAGCCG TGGCTCTTGC AATTAGAATT GGAATTGCAA AAGCCGTTTG TAGTGATTTG AATTGTATAA TATTGGATGA ACCAACAGCG TTCCTTGATG AAAATAGGAG ACATAATTTG TTAAGGGTAT TTAGAAATAT AAAGTCTCTC TCCCAGATAT TTGTAATATC TCATCATTCA GAATTAGAAC AGGTGGCAAA TAACACGATA ACTGTTGAAA AAAATATGGG AAATTCAATA ATAAGGAGCT CCTAA
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Protein sequence | MIIKNINIKN FRSHSNTDIS FKQGITTIIG ENGSGKSSIF EAMNYALFAP RRIKLSDAIK RGTDFFSISF EFEINGKRYK VIRGRGKKNI NYLYENDKPY SENNDEVNNK IKEILNMDDE VFSNAIYIKQ GDISSLIQIT PAERKKLIGK LLGIERYEQV WDKLKTPLKN MELDLKKIEG ELIQKEDINT NINNLKENME KNSKILKELQ DKFNHAVELR DRKEKLLKKW EKKEIENNNL QNNLKELKYG VETSENNIKI LISDLGAINT HNNILNSNYL NYSKYKEIEN KLKKLANELL QYKKYYDKFN ELNGEMKGLE KTIKEIDKKL IDKNPKNKSN SEIEQEINDI NKELNKLDDI LNKLKDLELL NKELTKIENS KKELNKNKEN YLKYLELSKK SKELNNKLME LSGIKEKEND LKQQIKSTEY KIKQLKQDLK DFNNIDIEIN KEKEIKTKYE DIVNKIDLLK EKIAQNNAEI NQTKDAIEKL KGTTEDKCPV CQSNIDGLKK QELLKQYNQL IEERKQKSNK LQIKYNKYLS EKKDIKDKLD KINNLKNKYG QLKEKNNNLI EEENKLIKLN NDLNVIGKDL EEYNKIIENI KTKENKLKEL EQYYKKYEYC ENFLKDSNEQ ELVDNKNKLL DIIGNNTNKS ILNTKKELNN KVGELNELLN LIRNKEQNMK KLNVVNKEID NLKDKVATNS QLEIEKNSNE KELIKYKDGY NQYNDSYAVL KNYADKYAVS IEEIRNKVNE LLKKENNNLN NLNNEIQNIK LSIEKLQYNI EEFEDIKKDY NKINNKVNEI NEDIIKLDTT IKNENKLLSE FENKLKQLEK LESKKEQLNN AIHNLANIRE AVFSKNGFQQ YLRQKYIPII QRHTNEVFNE FELPYSHIEI KNDYDITVDD NPVKTLSGGE QIAVALAIRI GIAKAVCSDL NCIILDEPTA FLDENRRHNL LRVFRNIKSL SQIFVISHHS ELEQVANNTI TVEKNMGNSI IRSS
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