Click on gene locus tag to view gene information
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123 Unclonable genes were found for selected organism/s
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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
B21_00026
CDS
NC_012892
24887
25150
-
264
hypothetical protein
YP_002997894
unclonable
0.000000313857
n/a
Escherichia coli BL21
Bacteria
-
B21_00027
CDS
NC_012892
25253
25471
+
219
hypothetical protein
YP_002997895
unclonable
0.000000259179
n/a
Escherichia coli BL21
Bacteria
-
B21_00028
CDS
NC_012892
25479
26420
+
942
hypothetical protein
YP_002997896
unclonable
0.000000926876
n/a
Escherichia coli BL21
Bacteria
-
B21_00057
CDS
NC_012892
58951
61305
-
2355
hypothetical protein
YP_002997924
unclonable
0.0000200577
n/a
Escherichia coli BL21
Bacteria
-
B21_00058
CDS
NC_012892
61560
62375
+
816
hypothetical protein
YP_002997925
unclonable
0.00000167853
n/a
Escherichia coli BL21
Bacteria
-
B21_00175
CDS
NC_012892
203320
203805
+
486
hypothetical protein
YP_002998040
unclonable
0.000000443159
n/a
Escherichia coli BL21
Bacteria
-
B21_00176
CDS
NC_012892
203809
204834
+
1026
hypothetical protein
YP_002998041
unclonable
0.00000115691
n/a
Escherichia coli BL21
Bacteria
-
B21_00177
CDS
NC_012892
204939
205394
+
456
hypothetical protein
YP_002998042
unclonable
0.000000343822
n/a
Escherichia coli BL21
Bacteria
-
B21_00302
CDS
NC_012892
332666
335740
-
3075
hypothetical protein
YP_002998161
unclonable
0.0000375259
n/a
Escherichia coli BL21
Bacteria
-
B21_00387
CDS
NC_012892
418246
419193
-
948
hypothetical protein
YP_002998244
unclonable
0.00000137293
n/a
Escherichia coli BL21
Bacteria
-
B21_00388
CDS
NC_012892
419655
421130
-
1476
hypothetical protein
YP_002998245
unclonable
0.00000464324
n/a
Escherichia coli BL21
Bacteria
-
B21_00389
CDS
NC_012892
421174
421752
-
579
hypothetical protein
YP_002998246
unclonable
0.000000638386
n/a
Escherichia coli BL21
Bacteria
-
B21_00390
CDS
NC_012892
422057
422374
+
318
hypothetical protein
YP_002998247
unclonable
0.00000034736
n/a
Escherichia coli BL21
Bacteria
-
B21_00539
CDS
NC_012892
570541
572781
-
2241
hypothetical protein
YP_002998390
unclonable
0.0000136629
n/a
Escherichia coli BL21
Bacteria
-
B21_00622
CDS
NC_012892
656795
658459
-
1665
hypothetical protein
YP_002998468
unclonable
0.00000498597
n/a
Escherichia coli BL21
Bacteria
-
B21_00635
CDS
NC_012892
672269
672814
+
546
hypothetical protein
YP_002998481
unclonable
0.000000205585
n/a
Escherichia coli BL21
Bacteria
-
B21_00691
CDS
NC_012892
737668
738459
+
792
hypothetical protein
YP_002998535
unclonable
0.000000612768
n/a
Escherichia coli BL21
Bacteria
-
B21_00762
CDS
NC_012892
795674
796351
+
678
hypothetical protein
YP_002998601
unclonable
0.000000475745
n/a
Escherichia coli BL21
Bacteria
-
B21_00957
CDS
NC_012892
1010451
1010993
+
543
hypothetical protein
YP_002998792
unclonable
0.00000043428
n/a
Escherichia coli BL21
Bacteria
-
B21_00962
CDS
NC_012892
1017758
1019398
+
1641
hypothetical protein
YP_002998797
unclonable
0.00000379419
n/a
Escherichia coli BL21
Bacteria
-
B21_00963
CDS
NC_012892
1019410
1019958
+
549
hypothetical protein
YP_002998798
unclonable
0.000000461465
n/a
Escherichia coli BL21
Bacteria
-
B21_00964
CDS
NC_012892
1020214
1020381
+
168
hypothetical protein
YP_002998799
unclonable
0.000000264477
n/a
Escherichia coli BL21
Bacteria
-
B21_00965
CDS
NC_012892
1020451
1020969
-
519
hypothetical protein
YP_002998800
unclonable
0.000000490701
n/a
Escherichia coli BL21
Bacteria
-
B21_00966
CDS
NC_012892
1021038
1022798
-
1761
hypothetical protein
YP_002998801
unclonable
0.00000557522
n/a
Escherichia coli BL21
Bacteria
-
B21_00967
CDS
NC_012892
1022984
1023436
+
453
hypothetical protein
YP_002998802
unclonable
0.000000351017
n/a
Escherichia coli BL21
Bacteria
-
B21_00968
CDS
NC_012892
1023512
1024552
-
1041
hypothetical protein
YP_002998803
unclonable
0.000000788885
n/a
Escherichia coli BL21
Bacteria
-
B21_01092
CDS
NC_012892
1148770
1149291
+
522
hypothetical protein
YP_002998922
unclonable
0.000000203492
n/a
Escherichia coli BL21
Bacteria
-
B21_01093
CDS
NC_012892
1149343
1149516
+
174
hypothetical protein
YP_002998923
unclonable
0.000000104927
n/a
Escherichia coli BL21
Bacteria
-
B21_01094
CDS
NC_012892
1149597
1150667
+
1071
hypothetical protein
YP_002998924
unclonable
0.000000594515
n/a
Escherichia coli BL21
Bacteria
-
B21_01095
CDS
NC_012892
1150735
1151688
+
954
hypothetical protein
YP_002998925
unclonable
0.000000485703
n/a
Escherichia coli BL21
Bacteria
-
B21_01096
CDS
NC_012892
1151704
1152633
+
930
hypothetical protein
YP_002998926
unclonable
0.000000570931
n/a
Escherichia coli BL21
Bacteria
-
B21_01097
CDS
NC_012892
1152646
1153380
+
735
hypothetical protein
YP_002998927
unclonable
0.000000400605
n/a
Escherichia coli BL21
Bacteria
-
B21_01098
CDS
NC_012892
1153591
1153827
+
237
hypothetical protein
YP_002998928
unclonable
0.000000144532
n/a
Escherichia coli BL21
Bacteria
-
B21_01169
CDS
NC_012892
1218742
1220010
+
1269
hypothetical protein
YP_002998995
unclonable
0.00000148835
n/a
Escherichia coli BL21
Bacteria
-
B21_01170
CDS
NC_012892
1220056
1220586
-
531
hypothetical protein
YP_002998996
unclonable
0.000000461465
n/a
Escherichia coli BL21
Bacteria
-
B21_01171
CDS
NC_012892
1220732
1222273
-
1542
hypothetical protein
YP_002998997
unclonable
0.00000261318
n/a
Escherichia coli BL21
Bacteria
-
B21_01172
CDS
NC_012892
1222494
1223213
+
720
hypothetical protein
YP_002998998
unclonable
0.000000480756
n/a
Escherichia coli BL21
Bacteria
-
B21_01173
CDS
NC_012892
1223265
1224797
-
1533
hypothetical protein
YP_002998999
unclonable
0.00000266726
n/a
Escherichia coli BL21
Bacteria
-
B21_01268
CDS
NC_012892
1326336
1327505
+
1170
hypothetical protein
YP_002999091
unclonable
0.00000197215
n/a
Escherichia coli BL21
Bacteria
-
B21_01510
CDS
NC_012892
1577059
1577745
+
687
hypothetical protein
YP_002999317
unclonable
0.000000749692
n/a
Escherichia coli BL21
Bacteria
-
B21_01636
CDS
NC_012892
1702004
1702240
+
237
hypothetical protein
YP_002999435
unclonable
0.00000034736
n/a
Escherichia coli BL21
Bacteria
-
B21_01637
CDS
NC_012892
1702304
1703308
-
1005
hypothetical protein
YP_002999436
unclonable
0.00000118084
n/a
Escherichia coli BL21
Bacteria
-
B21_01866
CDS
NC_012892
1936724
1937272
-
549
hypothetical protein
YP_002999658
unclonable
0.000000326821
n/a
Escherichia coli BL21
Bacteria
-
B21_01867
CDS
NC_012892
1937329
1938516
-
1188
hypothetical protein
YP_002999659
unclonable
0.000000955333
n/a
Escherichia coli BL21
Bacteria
-
B21_01868
misc_feature
NC_012892
1938518
1939159
-
642
unclonable
0.00000039643
n/a
Escherichia coli BL21
Bacteria
-
B21_01869
CDS
NC_012892
1939156
1939731
-
576
hypothetical protein
YP_002999660
unclonable
0.000000330184
n/a
Escherichia coli BL21
Bacteria
-
B21_01870
CDS
NC_012892
1939787
1940062
+
276
hypothetical protein
YP_002999661
unclonable
0.000000267198
n/a
Escherichia coli BL21
Bacteria
-
B21_01871
CDS
NC_012892
1939981
1940484
+
504
hypothetical protein
YP_002999662
unclonable
0.000000392392
n/a
Escherichia coli BL21
Bacteria
-
B21_01872
misc_feature
NC_012892
1940501
1941146
+
646
unclonable
0.000000490701
n/a
Escherichia coli BL21
Bacteria
-
B21_01873
CDS
NC_012892
1941254
1942612
-
1359
hypothetical protein
YP_002999663
unclonable
0.00000189435
n/a
Escherichia coli BL21
Bacteria
-
B21_01874
CDS
NC_012892
1942612
1943283
-
672
hypothetical protein
YP_002999664
unclonable
0.00000061937
n/a
Escherichia coli BL21
Bacteria
-
B21_01875
CDS
NC_012892
1943416
1943829
+
414
hypothetical protein
YP_002999665
unclonable
0.000000307569
n/a
Escherichia coli BL21
Bacteria
-
B21_01876
CDS
NC_012892
1943938
1944942
+
1005
hypothetical protein
YP_002999666
unclonable
0.000000821276
n/a
Escherichia coli BL21
Bacteria
-
B21_02184
CDS
NC_012892
2305197
2305739
-
543
hypothetical protein
YP_002999963
unclonable
0.000000358279
n/a
Escherichia coli BL21
Bacteria
-
B21_02267
CDS
NC_012892
2395103
2396518
-
1416
hypothetical protein
YP_003000044
unclonable
0.00000211719
n/a
Escherichia coli BL21
Bacteria
-
B21_02268
CDS
NC_012892
2397294
2397635
+
342
hypothetical protein
YP_003000045
unclonable
0.000000251341
n/a
Escherichia coli BL21
Bacteria
-
B21_02269
CDS
NC_012892
2397626
2398552
-
927
hypothetical protein
YP_003000046
unclonable
0.000000658143
n/a
Escherichia coli BL21
Bacteria
-
B21_02270
CDS
NC_012892
2398642
2399640
+
999
hypothetical protein
YP_003000047
unclonable
0.000000838069
n/a
Escherichia coli BL21
Bacteria
-
B21_02271
CDS
NC_012892
2399637
2399855
-
219
hypothetical protein
YP_003000048
unclonable
0.000000163075
n/a
Escherichia coli BL21
Bacteria
-
B21_02272
CDS
NC_012892
2399857
2401872
-
2016
hypothetical protein
YP_003000049
unclonable
0.00000450383
n/a
Escherichia coli BL21
Bacteria
-
B21_02273
CDS
NC_012892
2401943
2402929
-
987
hypothetical protein
YP_003000050
unclonable
0.000000612768
n/a
Escherichia coli BL21
Bacteria
-
B21_02274
CDS
NC_012892
2403159
2403920
+
762
hypothetical protein
YP_003000051
unclonable
0.000000358279
n/a
Escherichia coli BL21
Bacteria
-
B21_02275
CDS
NC_012892
2404105
2405076
+
972
hypothetical protein
YP_003000052
unclonable
0.000000749692
n/a
Escherichia coli BL21
Bacteria
-
B21_02276
CDS
NC_012892
2405460
2405717
+
258
hypothetical protein
YP_003000053
unclonable
0.000000185889
n/a
Escherichia coli BL21
Bacteria
-
B21_02277
CDS
NC_012892
2405762
2407489
+
1728
hypothetical protein
YP_003000054
unclonable
0.00000407326
n/a
Escherichia coli BL21
Bacteria
-
B21_02363
CDS
NC_012892
2497921
2499291
+
1371
hypothetical protein
YP_003000138
unclonable
0.00000142965
n/a
Escherichia coli BL21
Bacteria
-
B21_02446
CDS
NC_012892
2597323
2599896
-
2574
hypothetical protein
YP_003000219
unclonable
0.0000202693
n/a
Escherichia coli BL21
Bacteria
-
B21_02584
CDS
NC_012892
2736545
2737216
-
672
hypothetical protein
YP_003000355
unclonable
0.000000638386
n/a
Escherichia coli BL21
Bacteria
-
B21_02591
CDS
NC_012892
2743215
2745449
-
2235
hypothetical protein
YP_003000362
unclonable
0.0000104096
n/a
Escherichia coli BL21
Bacteria
-
B21_02703
CDS
NC_012892
2883580
2884905
-
1326
hypothetical protein
YP_003000470
unclonable
0.00000102485
n/a
Escherichia coli BL21
Bacteria
-
B21_02704
CDS
NC_012892
2884931
2885509
-
579
hypothetical protein
YP_003000471
unclonable
0.000000286708
n/a
Escherichia coli BL21
Bacteria
-
B21_02705
CDS
NC_012892
2885677
2886006
+
330
hypothetical protein
YP_003000472
unclonable
0.000000185889
n/a
Escherichia coli BL21
Bacteria
-
B21_02760
CDS
NC_012892
2940606
2941565
+
960
hypothetical protein
YP_003000524
unclonable
0.000000757589
n/a
Escherichia coli BL21
Bacteria
-
B21_02761
CDS
NC_012892
2941630
2942547
+
918
hypothetical protein
YP_003000525
unclonable
0.000000765386
n/a
Escherichia coli BL21
Bacteria
-
B21_02762
CDS
NC_012892
2943012
2943581
+
570
hypothetical protein
YP_003000526
unclonable
0.000000612768
n/a
Escherichia coli BL21
Bacteria
-
B21_02763
CDS
NC_012892
2943819
2944109
-
291
hypothetical protein
YP_003000527
unclonable
0.000000369366
n/a
Escherichia coli BL21
Bacteria
-
B21_02764
CDS
NC_012892
2944869
2945888
+
1020
hypothetical protein
YP_003000528
unclonable
0.000000908304
n/a
Escherichia coli BL21
Bacteria
-
B21_02765
CDS
NC_012892
2945960
2947108
+
1149
hypothetical protein
YP_003000529
unclonable
0.00000109995
n/a
Escherichia coli BL21
Bacteria
-
B21_02766
CDS
NC_012892
2947132
2948808
+
1677
hypothetical protein
YP_003000530
unclonable
0.00000332683
n/a
Escherichia coli BL21
Bacteria
-
B21_02767
CDS
NC_012892
2948818
2949558
+
741
hypothetical protein
YP_003000531
unclonable
0.000000588459
n/a
Escherichia coli BL21
Bacteria
-
B21_02768
CDS
NC_012892
2949555
2951582
+
2028
hypothetical protein
YP_003000532
unclonable
0.00000859987
n/a
Escherichia coli BL21
Bacteria
-
B21_02769
CDS
NC_012892
2951617
2952849
+
1233
hypothetical protein
YP_003000533
unclonable
0.00000176543
n/a
Escherichia coli BL21
Bacteria
-
B21_02770
CDS
NC_012892
2953103
2954062
-
960
hypothetical protein
YP_003000534
unclonable
0.00000174744
n/a
Escherichia coli BL21
Bacteria
-
B21_02771
CDS
NC_012892
2954097
2955236
-
1140
hypothetical protein
YP_003000535
unclonable
0.00000264009
n/a
Escherichia coli BL21
Bacteria
-
B21_02772
CDS
NC_012892
2956512
2957015
-
504
hypothetical protein
YP_003000536
unclonable
0.000000838069
n/a
Escherichia coli BL21
Bacteria
-
B21_02773
CDS
NC_012892
2956934
2957209
-
276
hypothetical protein
YP_003000537
unclonable
0.000000500973
n/a
Escherichia coli BL21
Bacteria
-
B21_02774
CDS
NC_012892
2957238
2957960
-
723
hypothetical protein
YP_003000538
unclonable
0.00000113372
n/a
Escherichia coli BL21
Bacteria
-
B21_02775
CDS
NC_012892
2957978
2959294
-
1317
hypothetical protein
YP_003000539
unclonable
0.00000201247
n/a
Escherichia coli BL21
Bacteria
-
B21_02776
CDS
NC_012892
2959563
2960240
-
678
hypothetical protein
YP_003000540
unclonable
0.000000456764
n/a
Escherichia coli BL21
Bacteria
-
B21_02777
CDS
NC_012892
2960237
2961013
-
777
hypothetical protein
YP_003000541
unclonable
0.000000408892
n/a
Escherichia coli BL21
Bacteria
-
B21_02778
CDS
NC_012892
2962074
2962610
-
537
hypothetical protein
YP_003000542
unclonable
0.000000246305
n/a
Escherichia coli BL21
Bacteria
-
B21_02779
CDS
NC_012892
2962612
2962884
-
273
hypothetical protein
YP_003000543
unclonable
0.000000163075
n/a
Escherichia coli BL21
Bacteria
-
B21_02780
misc_feature
NC_012892
2962884
2963471
-
588
unclonable
0.000000256539
n/a
Escherichia coli BL21
Bacteria
-
B21_02781
CDS
NC_012892
2963786
2964763
-
978
hypothetical protein
YP_003000544
unclonable
0.000000553793
n/a
Escherichia coli BL21
Bacteria
-
B21_02782
CDS
NC_012892
2964760
2965329
-
570
hypothetical protein
YP_003000545
unclonable
0.00000034032
n/a
Escherichia coli BL21
Bacteria
-
B21_02783
CDS
NC_012892
2965362
2965733
-
372
hypothetical protein
YP_003000546
unclonable
0.000000320273
n/a
Escherichia coli BL21
Bacteria
-
B21_02784
CDS
NC_012892
2965730
2966260
-
531
hypothetical protein
YP_003000547
unclonable
0.00000039643
n/a
Escherichia coli BL21
Bacteria
-
B21_02785
CDS
NC_012892
2966297
2966752
-
456
hypothetical protein
YP_003000548
unclonable
0.000000404727
n/a
Escherichia coli BL21
Bacteria
-
B21_02786
CDS
NC_012892
2966769
2967992
-
1224
hypothetical protein
YP_003000549
unclonable
0.00000209561
n/a
Escherichia coli BL21
Bacteria
-
B21_02787
CDS
NC_012892
2967992
2969485
-
1494
hypothetical protein
YP_003000550
unclonable
0.0000039107
n/a
Escherichia coli BL21
Bacteria
-
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