8 homologs were found in PanDaTox collection
for query gene YpAngola_A2197 on replicon NC_010159
Organism: Yersinia pestis Angola



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010159  YpAngola_A2197  hypothetical protein  100 
 
 
194 aa  402  1e-111  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3411  hypothetical protein  38.66 
 
 
224 aa  125  4.0000000000000003e-28  Pseudomonas putida GB-1  Bacteria  normal  unclonable  1.18281e-16 
 
 
-
 
NC_009656  PSPA7_2412  hypothetical protein  33.01 
 
 
224 aa  114  1.0000000000000001e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.144102  n/a   
 
 
-
 
NC_007005  Psyr_2785  hypothetical protein  34.02 
 
 
218 aa  108  6e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.128294 
 
 
-
 
NC_010002  Daci_3245  hypothetical protein  33.91 
 
 
189 aa  99.8  2e-20  Delftia acidovorans SPH-1  Bacteria  hitchhiker  0.0000619696  hitchhiker  0.0000000118682 
 
 
-
 
NC_008044  TM1040_0810  hypothetical protein  36.26 
 
 
133 aa  53.9  0.000002  Ruegeria sp. TM1040  Bacteria  normal  0.640809  hitchhiker  0.000556523 
 
 
-
 
NC_009512  Pput_3372  hypothetical protein  34.31 
 
 
128 aa  53.5  0.000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2080  conserved hypothetical protein, internal deletion  40.85 
 
 
126 aa  48.1  0.00009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  hitchhiker  0.0036018  n/a   
 
 
-
 
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