Gene Daci_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3245 
Symbol 
ID5748829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3552701 
End bp3553270 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID641298348 
Producthypothetical protein 
Protein accessionYP_001564268 
Protein GI160898686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000619696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000118682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTCG CTGACGATCT GCAGCGCGTG TGCCTGGTGC AAATCGAACG CTCCCGGGAG 
ATTGTTCGCA GAACGTTGCT TGAGATCCTC AGCGACTGCG TGGATGGCTC CCCTGTCGGG
AACCCGGATC TGTGGAAGGC GAATCAAGGC GTCATATCTT CAAGAGAGGC ATACCGCGAG
GAGGCTTTCA CGTACAACGC GGCGAATCCT GGCAAGCGGC GCAAGGGCAC GAGCAGGCAG
GTGGTGAACA AGAAATTCCC TCTGGCTGTC GGCAAGGGCT ACACAGGCGG GCGCTTCAAA
AACAACTGGC AGGTTGGGAT CGGGTTCATC AACGCAGCCG TTGAGGAGAC TCCAGACGCA
AGCGGGTCCG GCTCTCTGAA GCGTGCCGCT ACGGTGTTCG ACGGATTGAA GCTCGGGATG
GTGATCTACG TCTCAAACAA CCTTCCATAC GCGAAGCGCC TTGAATATGG CTGGTCCAAG
CAGGCTCCAA ACGGAATGGT GCGGTTGTCG CTTCAGAACA CTGGGCAGGC ACTGAAGAAG
ACGGCAGATG CAGTGAGGGG TGAAGCATGA
 
Protein sequence
MGFADDLQRV CLVQIERSRE IVRRTLLEIL SDCVDGSPVG NPDLWKANQG VISSREAYRE 
EAFTYNAANP GKRRKGTSRQ VVNKKFPLAV GKGYTGGRFK NNWQVGIGFI NAAVEETPDA
SGSGSLKRAA TVFDGLKLGM VIYVSNNLPY AKRLEYGWSK QAPNGMVRLS LQNTGQALKK
TADAVRGEA