9 homologs were found in PanDaTox collection
for query gene Xfasm12_0908 on replicon NC_010513
Organism: Xylella fastidiosa M12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010513  Xfasm12_0908  putative DNA packaging protein GP2  100 
 
 
472 aa  984    Xylella fastidiosa M12  Bacteria  normal  0.75032  n/a   
 
 
-
 
NC_009636  Smed_1839  hypothetical protein  64.3 
 
 
477 aa  582  1.0000000000000001e-165  Sinorhizobium medicae WSM419  Bacteria  normal  0.244964  normal  0.210765 
 
 
-
 
NC_011205  SeD_A0638  terminase large subunit  45.12 
 
 
499 aa  381  1e-104  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.317674 
 
 
-
 
NC_011083  SeHA_C0400  DNA packaging protein gp2  44.9 
 
 
499 aa  378  1e-103  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.000000000000209309 
 
 
-
 
NC_009511  Swit_4440  hypothetical protein  62.45 
 
 
276 aa  318  2e-85  Sphingomonas wittichii RW1  Bacteria  normal  0.515296  normal 
 
 
-
 
NC_010577  XfasM23_0532  bacteriophage terminase large (ATPase) subunit and inactivated derivatives-like protein  76.4 
 
 
291 aa  263  4.999999999999999e-69  Xylella fastidiosa M23  Bacteria  normal  0.523182  n/a   
 
 
-
 
NC_009511  Swit_4436  bacteriophage terminase large (ATPase) subunit and inactivated derivatives-like protein  51.6 
 
 
225 aa  212  1e-53  Sphingomonas wittichii RW1  Bacteria  normal  0.234178  normal 
 
 
-
 
NC_010513  Xfasm12_1760  hypothetical protein  79.66 
 
 
78 aa  92.4  1e-17  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0577  hypothetical protein  72.5 
 
 
47 aa  64.3  0.000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
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