Gene Swit_4436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4436 
Symbol 
ID5197311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4885350 
End bp4886027 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID640583988 
Productbacteriophage terminase large (ATPase) subunit and inactivated derivatives-like protein 
Protein accessionYP_001264912 
Protein GI148557330 
COG category[R] General function prediction only 
COG ID[COG5565] Bacteriophage terminase large (ATPase) subunit and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.234178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG ACATATCCTT GGGCGGCTTG CAGCGGCGGG CGCTGGGCCT GGCCCGTGAA 
CTGGCGCGGC GGCGCGGGCG CGACCGGCTG TCCGCCTATC GTCCCTATGC CAAGCAGCGC
GAATTCCACG ATGCGGGCGC CGAGCATCGC GAACGGCTGT TCATGGCGGG CAACCAGCTC
GGCAAGACCG TGGCGGGATC GTTCGAGATC GCCATGCATC TGACCGGCCG TTATCCCGGC
TGGTGGCGGG GGCGGCGCTT CGATGCGCCC GGCCGCTACT GGGTGGCGGG CGAGACGCGG
ATCTCGACCC GCGACACGGT GCAGAAGCTG CTGCTCGGCG ACCCCGAACG CCCGGAGGCC
TGGGGCACCG GCGCGATCCC CGGCGCGGCG ATCCGCACGA CCCACCGCGC ATCGGGCGTG
GCCAATGCGA TCGACACGCT GACCGTCGCG CATGTGGCGG GCGGCGCCTC GACCCTGTTG
TTCAAGGCCT ATGAGCAGGG ACGGGCCAAA TGGCAGGGCG ACACGCTGAA CGGCATCTGG
TTCGACGAGG AGCCGCCGCT CGACATCTAT GTCGAGGGCC TGACCCGCAC CAACGCGACC
GGGGGCTTCG CGATGCTGAC CTTCACCCCG CTGAAGGGGA TGAGCGAGGT GGTGCGGATG
TTCCTGGAGG AAGCCTGA
 
Protein sequence
MSSDISLGGL QRRALGLARE LARRRGRDRL SAYRPYAKQR EFHDAGAEHR ERLFMAGNQL 
GKTVAGSFEI AMHLTGRYPG WWRGRRFDAP GRYWVAGETR ISTRDTVQKL LLGDPERPEA
WGTGAIPGAA IRTTHRASGV ANAIDTLTVA HVAGGASTLL FKAYEQGRAK WQGDTLNGIW
FDEEPPLDIY VEGLTRTNAT GGFAMLTFTP LKGMSEVVRM FLEEA