Gene Swit_4440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4440 
Symbol 
ID5199539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4887744 
End bp4888574 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content68% 
IMG OID640583992 
Producthypothetical protein 
Protein accessionYP_001264916 
Protein GI148557334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.515296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTGC AACGTCCCTG GACGTGGGCC CTGAATGCGC ACCGAGAAGG CCGAAATCAC 
AAGCTTGTCT ACCTGTGGGA GACGCCCATG ACCCGTCACG TCACCCGCAT GACGATCGAC
GATGCCGAGC ATTACAGCCC GGCCGAGCGC GCGGCGATCG TCGCATCCTA TCCGGCGCAT
GAGCGCAAGG CCCGGGCCGA GGGGATTCCG ATGCTGGGAT CGGGGCGGGT GTTCCCGGTC
GACGAGGACG TGATCAAGAT ACGCGCCTTC GAGGTGCCGG CGGGCTGGAC GCAGATCGGG
GGCATCGACT TCGGCTGGGA CCATCCGACG GCGGCGGTGC GGCTCGCCTG GGACCGCGAC
GCCGACTGCA TCTATGTGAC CGCGAGCTAT GGCGTGCGCG AGGCGACACC GATCCTGCAC
GCCGCCGCGC TCAAGCCGTG GGGGAACTGG CTCCCTTGGG CCTGGCCGCA TGACGGGTTG
CAGCACGACA AGGGATCGGG CGCGGCGCTG GCGCAGCAAT ATCGCGACCA GGGCCTGTCG
CTGCTGCCCG AGAAGGCGAG CTTCGAGGAG GGCGGCAACG GCGTGGAGGC GGGCATCGCC
GAGATGCTCG ACCGGATGCT GTCGGGCCGA TGGAAGGTGT TCGACCATCT CGAGGACTGG
TTCGCCGAGT TCCGCCTTTA CCACCGCAAG GACGGATCGG TCGTGAAGAC CAACGACGAC
CGCCTGTCGG CGTCCCGCTA CGCGATGATG ATGAAGCGGT TCGCGGTGAC GGCGCCGGCG
GCGCGCGAGG TGAACGCGCC GTCTTTTGGG ACGGGAAGCT GGATGGGGTG A
 
Protein sequence
MGVQRPWTWA LNAHREGRNH KLVYLWETPM TRHVTRMTID DAEHYSPAER AAIVASYPAH 
ERKARAEGIP MLGSGRVFPV DEDVIKIRAF EVPAGWTQIG GIDFGWDHPT AAVRLAWDRD
ADCIYVTASY GVREATPILH AAALKPWGNW LPWAWPHDGL QHDKGSGAAL AQQYRDQGLS
LLPEKASFEE GGNGVEAGIA EMLDRMLSGR WKVFDHLEDW FAEFRLYHRK DGSVVKTNDD
RLSASRYAMM MKRFAVTAPA AREVNAPSFG TGSWMG