9 homologs were found in PanDaTox collection
for query gene Xaut_3604 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_3604  hypothetical protein  100 
 
 
369 aa  738    Xanthobacter autotrophicus Py2  Bacteria  normal  0.808419  normal 
 
 
-
 
NC_008687  Pden_3738  Fis family transcriptional regulator  42.51 
 
 
323 aa  147  2.0000000000000003e-34  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00315119  normal  0.324352 
 
 
-
 
NC_009524  PsycPRwf_1347  hypothetical protein  38.53 
 
 
322 aa  134  3e-30  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00000342726  decreased coverage  0.0000821866 
 
 
-
 
NC_013721  HMPREF0424_0967  hypothetical protein  28.33 
 
 
287 aa  63.5  0.000000005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.621183 
 
 
-
 
NC_009656  PSPA7_2380  hypothetical protein  26.12 
 
 
264 aa  57  0.0000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0722  hypothetical protein  24.54 
 
 
360 aa  46.6  0.0006  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2282  hypothetical protein  27.54 
 
 
213 aa  45.8  0.001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.330275 
 
 
-
 
NC_011894  Mnod_4106  hypothetical protein  24.51 
 
 
365 aa  45.4  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.894986  n/a   
 
 
-
 
NC_013161  Cyan8802_2208  hypothetical protein  31.19 
 
 
1218 aa  43.5  0.006  Cyanothece sp. PCC 8802  Bacteria  unclonable  0.00220427  normal  0.956264 
 
 
-
 
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