8 homologs were found in PanDaTox collection
for query gene Vapar_5860 on replicon NC_012792
Organism: Variovorax paradoxus S110



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5860  transcriptional regulator, XRE family  100 
 
 		 146 aa  281  1.0000000000000001e-75  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3229  transcriptional regulator, XRE family  75.17 
 
 		 148 aa  198  1.9999999999999998e-50  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007950  Bpro_5522  hypothetical protein  44.85 
 
 		 157 aa  104  4e-22  Polaromonas sp. JS666  Bacteria  normal  0.821481  normal  0.782262 
 
 
-
 
NC_007949  Bpro_5021  XRE family transcriptional regulator  43.66 
 
 		 147 aa  102  2e-21  Polaromonas sp. JS666  Bacteria  normal  0.621734  normal  1 
 
 
-
 
NC_007948  Bpro_0375  hypothetical protein  44.09 
 
 		 124 aa  94.7  4e-19  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000571325  normal  0.258978 
 
 
-
 
NC_009675  Anae109_4076  helix-turn-helix domain-containing protein  34.88 
 
 		 157 aa  45.1  0.0003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.541899 
 
 
-
 
NC_011138  MADE_00074  DNA-binding protein  32.76 
 
 		 101 aa  40.8  0.006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4780  hypothetical protein  44.68 
 
 		 269 aa  40  0.01  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>