8 homologs were found in PanDaTox collection
for query gene Vapar_3229 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_3229  transcriptional regulator, XRE family  100 
 
 		 148 aa  288  2e-77  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5860  transcriptional regulator, XRE family  75.17 
 
 		 146 aa  198  1.9999999999999998e-50  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007950  Bpro_5522  hypothetical protein  46.9 
 
 		 157 aa  115  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  0.821481  normal  0.782262 
 
 
-
 
NC_007949  Bpro_5021  XRE family transcriptional regulator  46.1 
 
 		 147 aa  112  1.0000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  0.621734  normal  1 
 
 
-
 
NC_007948  Bpro_0375  hypothetical protein  40.32 
 
 		 124 aa  89.7  1e-17  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000571325  normal  0.258978 
 
 
-
 
NC_009483  Gura_0786  helix-turn-helix domain-containing protein  43.9 
 
 		 103 aa  42  0.003  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_013510  Tcur_4780  hypothetical protein  46.81 
 
 		 269 aa  42  0.003  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_4076  helix-turn-helix domain-containing protein  47.5 
 
 		 157 aa  41.6  0.004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.541899 
 
 
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