8 homologs were found in PanDaTox collection
for query gene Vapar_5666 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_5666  hypothetical protein  100 
 
 
244 aa  492  9.999999999999999e-139  Variovorax paradoxus S110  Bacteria  normal  0.889087  n/a   
 
 
-
 
NC_008825  Mpe_A0784  hypothetical protein  64.07 
 
 
231 aa  290  1e-77  Methylibium petroleiphilum PM1  Bacteria  normal  0.0152109  normal 
 
 
-
 
NC_008781  Pnap_0378  hypothetical protein  59.05 
 
 
232 aa  265  4e-70  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.607065 
 
 
-
 
NC_013441  Gbro_1635  hypothetical protein  47.64 
 
 
227 aa  194  1e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009705  YpsIP31758_B0055  hypothetical protein  37.9 
 
 
242 aa  142  6e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  decreased coverage  0.0000504638  n/a   
 
 
-
 
NC_012850  Rleg_0919  hypothetical protein  41.55 
 
 
232 aa  134  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00601906  normal  0.153009 
 
 
-
 
NC_011369  Rleg2_0806  hypothetical protein  40.19 
 
 
232 aa  133  3e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.319264 
 
 
-
 
NC_011885  Cyan7425_0180  Domain of unknown function DUF1814  37.39 
 
 
263 aa  114  2.0000000000000002e-24  Cyanothece sp. PCC 7425  Bacteria  n/a    normal  0.125198 
 
 
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