Gene YpsIP31758_B0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0055 
Symbol 
ID5384198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand+ 
Start bp58563 
End bp59291 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID640857164 
Producthypothetical protein 
Protein accessionYP_001393353 
Protein GI153930742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0000504638 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAT ATCGGCTGGA GCATCACAAC AAAATAGCCG GTATTCTTGA TTCCATTGAC 
GCTAATTTTA TTGAAGATGC CGAGTGCTAC TTTGCAGGCG GCACAGCCAT TGTCATGTTG 
CTTGATGAGT ATCGGGAGTC CATCGATATT GATTTCTTAT GCTCATCACG AGAAGGCTAC 
AGTAAGCTCC GTAGTACTGT CACGAATGAT AGCTTTGGTC AGGTATTCAA ACAGCCAGTT 
AACTATGGCA GCGACGTTAG GGCGAATCAG TATGGTATCA GATCGGTTGT GCTGGCCGAC 
GATACCCGCA TCAGAATGGA GTTCGTGAGT GAAGGGCGCT TGGATTTGGG CTTTGGTGGT 
CGGATTCATG GTATCCCTAC GCTATCCCAA GAAGATTTCT TTGCCACAAA GCTATTGGCT 
AATGCCGATA GAGGCAGAGA CAAATCTACC CAGTTCAAAG ACATGATCGA TATCGCGATG 
ATGATCAGCG CGTGGGGGGA TATTCCGCAA GTATCATGGG ATAAAGCTAG AGCAGCCTAT 
GGCCAGTCGA TTGATAAAGA ATATAATGCT GTTATTGACA TGATGAACGG CAATAAACTT 
CATTTTGACC GCTGTATGGG GTTGCTGCAT ATCTCTGAAG AGAACACGGA TAAAATCATT 
TCAGCACTGA ATTTGTCTTT CCCTGATAAT GATTACGAAT CTGACTTCAT GACTGACCTC 
AGTCGATAA
 
Protein sequence
MYKYRLEHHN KIAGILDSID ANFIEDAECY FAGGTAIVML LDEYRESIDI DFLCSSREGY 
SKLRSTVTND SFGQVFKQPV NYGSDVRANQ YGIRSVVLAD DTRIRMEFVS EGRLDLGFGG 
RIHGIPTLSQ EDFFATKLLA NADRGRDKST QFKDMIDIAM MISAWGDIPQ VSWDKARAAY 
GQSIDKEYNA VIDMMNGNKL HFDRCMGLLH ISEENTDKII SALNLSFPDN DYESDFMTDL 
SR