Gene Pnap_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0378 
Symbol 
ID4689503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp376278 
End bp376976 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID639833371 
Producthypothetical protein 
Protein accessionYP_980622 
Protein GI121603293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.607065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC GACCCCACCA CCAGCGCATT GCACAGGTAC TGCGCGCGCT CAATGCGCCG 
CTGCTGCGTG AAAACCTCTG TCTGTTTGGC GGGGGTACGG CCATCGCGCT GCGCTATGGC
GAATACCGTG AGTCGGTTGA CATGGACTTT CTGGTATCAA GCCTTGCCAG CTACCGCAAC
CTGCGCCAGT TGCTGACCAA CCCCGGCGGC ATTGCCGGCA TTGTTCATGC CCAGGCGGCA
CCCTTGGAGC AAATCAAGGA GGTGCGGGCG GATCAATATG GCATTCGGAC CCTGCTGCGT
GTGGACGGTC AGCCCATCAA GTTCGAGATT ATTTTGGAGG GCCGCATCCA GCTGGCGGCG
CCGACGGCGA AAGATGAAGT CTGCGGTGTC GCCACGTTGA GCCCCCTGGA CATGGCTGCG
TCCAAGCTGC TGGCCAATTC AGACCGATGG GGCGACGACG GCGTATTCAA CCGCGACGTA
ATTGACCTGG CCATGATGAA GCCGTCGCTG GCACTGCTGC GCCAGGCACT GCTGAAAGCG
CACGGCGCCT ATGGCCAGGC CATCCGGCAG GACTTGGACA AGGCTCTTTT GCGGCTGCAA
ACCCGGCAGG GCTGGCTGGA GCGCTGCATG CAGGCCATGG CCATGGTGGA ACCCAAGGCC
GTGGTGTGGC AGCGGCTTCG GGCGCTGCGC AGGAATTGA
 
Protein sequence
MFERPHHQRI AQVLRALNAP LLRENLCLFG GGTAIALRYG EYRESVDMDF LVSSLASYRN 
LRQLLTNPGG IAGIVHAQAA PLEQIKEVRA DQYGIRTLLR VDGQPIKFEI ILEGRIQLAA
PTAKDEVCGV ATLSPLDMAA SKLLANSDRW GDDGVFNRDV IDLAMMKPSL ALLRQALLKA
HGAYGQAIRQ DLDKALLRLQ TRQGWLERCM QAMAMVEPKA VVWQRLRALR RN