9 homologs were found in PanDaTox collection
for query gene Vapar_0619 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_0619  Cupin 2 conserved barrel domain protein  100 
 
 		 140 aa  290  5e-78  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_013739  Cwoe_3894  cupin 2 conserved barrel domain protein  61.83 
 
 		 156 aa  185  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.186133 
 
 
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NC_009484  Acry_1969  anti-ECFsigma factor, ChrR  28.33 
 
 		 232 aa  47  0.00009  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
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NC_008345  Sfri_0852  anti-ECFsigma factor, ChrR  29.52 
 
 		 214 aa  45.4  0.0002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.413109  n/a   
 
 
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NC_010506  Swoo_1495  anti-ECFsigma factor, ChrR  32.22 
 
 		 222 aa  43.9  0.0007  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_4298  cupin 2 domain-containing protein  29.63 
 
 		 168 aa  41.6  0.003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.468275  normal  1 
 
 
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NC_003910  CPS_0821  hypothetical protein  34.07 
 
 		 214 aa  41.2  0.005  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_007520  Tcr_1225  anti-sigm factor, ChrR  26.37 
 
 		 220 aa  40.4  0.007  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00201902  n/a   
 
 
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NC_013422  Hneap_1373  anti-ECFsigma factor, ChrR  27.27 
 
 		 239 aa  40.8  0.007  Halothiobacillus neapolitanus c2  Bacteria  normal  0.86738  n/a   
 
 
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