Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0821 |
Symbol | |
ID | 3520992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 837156 |
End bp | 837800 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637283286 |
Product | hypothetical protein |
Protein accession | YP_267570 |
Protein GI | 71280526 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3806] Anti-sigma factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAATA TGAACTTCGA TGAACAAGTA TTTATTAATA CACAGGAACA ACCTTGGGTA GCAAGTCCTA AAGCCGGTGT TTGGCGTAAG CCTTTAGCCA GAGAAGATGC AGAAAGAGGT CATGCAACGA GCTTGGTAAA ATTTGATCCC GGCGCTAGCT TTACTGAACA TGATCACCCG CTAGGCGAAG AGATCCTTGT CCTCTCAGGC ACCTTTTCTG ATCACACTGG CGATTATCAT GCAGGCAGCT ACTTTCGAAA CCCTGAAGGA TTTCGTCATG CACCTTTTAG TAAAGATGGC TGTATATTAT TAGTAAAACT TCACCAATTT CAATCCGGTG ATAATGAACA TGTTGTCATC GATACCGCTA ATAAAAGCTG GTCACCGGGC ATGGGTAATT TAATGGTTAT GCCGTTGCAT AGCTTTGAAG GAGAATCAAC CGCACTTGTT AAATGGCCTA AAGATGAGCG ATTTCAGCCT CATAAGCATT TTGGGGGTGA AGAAATATTT GTCATTAGTG GCGAATTTAT AGATGAGCAT GGTCGCTATC CAGAAGGTTC TTGGATTCGT AGCCCTCACC TGAGCGAGCA CTTTCCGTAT GTAGAACAGG AAACGATTAT ATTGGTTAAG GTGGGCCATC TATAA
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Protein sequence | MLNMNFDEQV FINTQEQPWV ASPKAGVWRK PLAREDAERG HATSLVKFDP GASFTEHDHP LGEEILVLSG TFSDHTGDYH AGSYFRNPEG FRHAPFSKDG CILLVKLHQF QSGDNEHVVI DTANKSWSPG MGNLMVMPLH SFEGESTALV KWPKDERFQP HKHFGGEEIF VISGEFIDEH GRYPEGSWIR SPHLSEHFPY VEQETIILVK VGHL
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