6 homologs were found in PanDaTox collection
for query gene VEA_001320 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_001320  capsular polysaccharide synthesis enzyme cpsG Lipid A core - O-antigen ligase  100 
 
 
417 aa  842    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05201  hypothetical protein  74.26 
 
 
419 aa  594  1e-169  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_1691  O-antigen polymerase  27.05 
 
 
512 aa  48.1  0.0003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.121195  n/a   
 
 
-
 
NC_009012  Cthe_2638  O-antigen polymerase  26.14 
 
 
428 aa  44.3  0.004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0799  O-antigen polymerase  24.34 
 
 
465 aa  43.9  0.005  Halorhodospira halophila SL1  Bacteria  decreased coverage  0.00494175  n/a   
 
 
-
 
NC_009719  Plav_1918  O-antigen polymerase  25 
 
 
420 aa  43.9  0.006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.998924 
 
 
-
 
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