12 homologs were found in PanDaTox collection
for query gene Tpau_1136 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1136  TAP domain protein  100 
 
 
514 aa  1008    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3412  TAP domain protein  34.49 
 
 
766 aa  180  4.999999999999999e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0438  TAP domain protein  31.28 
 
 
542 aa  120  4.9999999999999996e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  0.574551  n/a   
 
 
-
 
NC_014165  Tbis_1042  TAP domain-containing protein  36.67 
 
 
535 aa  51.6  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0225624 
 
 
-
 
NC_013093  Amir_6096  TAP domain protein  38.89 
 
 
557 aa  50.4  0.00008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1966  hypothetical protein  35.21 
 
 
530 aa  48.9  0.0002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.52219  normal 
 
 
-
 
NC_013510  Tcur_3369  TAP domain protein  34.21 
 
 
547 aa  48.5  0.0003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0557447  n/a   
 
 
-
 
NC_007333  Tfu_0750  putative secreted peptidase  36.56 
 
 
521 aa  43.9  0.008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3329  tripeptidyl-peptidase B  38.81 
 
 
533 aa  43.5  0.008  Mycobacterium sp. MCS  Bacteria  normal  0.224727  n/a   
 
 
-
 
NC_008705  Mkms_3391  tripeptidyl-peptidase B  38.81 
 
 
508 aa  43.5  0.008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.349155 
 
 
-
 
NC_009077  Mjls_3340  tripeptidyl-peptidase B  38.81 
 
 
508 aa  43.5  0.008  Mycobacterium sp. JLS  Bacteria  normal  0.478437  normal  0.109915 
 
 
-
 
NC_009338  Mflv_2906  alpha/beta hydrolase fold  39.13 
 
 
505 aa  43.9  0.008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.834545 
 
 
-
 
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