7 homologs were found in PanDaTox collection
for query gene Tcr_1934 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_1934  hypothetical protein  100 
 
 
154 aa  309  9e-84  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.121616  n/a   
 
 
-
 
NC_008709  Ping_2356  hypothetical protein  42.47 
 
 
151 aa  139  9.999999999999999e-33  Psychromonas ingrahamii 37  Bacteria  normal  decreased coverage  0.000744981 
 
 
-
 
NC_007404  Tbd_0966  hypothetical protein  36.51 
 
 
167 aa  82.8  0.000000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.864175  normal 
 
 
-
 
NC_013889  TK90_0523  hypothetical protein  21.78 
 
 
188 aa  48.5  0.00003  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0845  hypothetical protein  19.58 
 
 
141 aa  45.8  0.0002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.218902  n/a   
 
 
-
 
NC_013223  Dret_0334  hypothetical protein  23.61 
 
 
186 aa  45.1  0.0003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.479638  normal 
 
 
-
 
NC_013730  Slin_6024  hypothetical protein  27.96 
 
 
183 aa  42.4  0.003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.119535 
 
 
-
 
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