| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0334 |
|---|
| Symbol | |
|---|
| ID | 8418138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 418989 |
|---|
| End bp | 419549 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645036899 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003197214 |
|---|
| Protein GI | 258404472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.479638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGAT TTGGGGCGCC CCCCTTGCTC GAAACGCTTG GAAAGCGCTT TGCGATGGCC
GCCGCCGGTG TGGAGTCGGT CTCTTTTTTC ACAGTGGCAC CCCTAGAAGG ATGGACAATG
GAATTACCGC GATTAAGTAT CGGTGTGGTG GGTCTTAGCC TGTTGTTTTT TCTTGTTAGC
TGCGGAGGGG ATAGCACTGA AAAGACAGGG GCTGAAGATG TTAAAAAGGA AACCAAGGAA
GCAGTGGAAG CGGTTCAGGA TTACGCCTCT GAGAAAAAGG CGGATTTTGA AGAGCAAATT
CGTCAGCAGC TCGATGCTCT CAAACAGGAT ATCGCCCAGT TGGAGAGCAA AGTGGAAGCT
ATGGGCCAAG ACGCCCAGGA AGGTATGGAG GAACAGCTCG CGGCCTTGAA AGAGCAGCGC
CAGAATCTCC AGGCGAAGTT GGAGCAGCTT CAGGATGCCG GCAATGATAC GTGGCAGGAG
CTGAAAAAAG AGTCCAGTCA GGCCATGGAA GACCTCAAAC AGTCCTATGA GGATTTGCAG
TCCTCGACGT CGGAAAACTA A
|
|---|
| Protein sequence | MQGFGAPPLL ETLGKRFAMA AAGVESVSFF TVAPLEGWTM ELPRLSIGVV GLSLLFFLVS
CGGDSTEKTG AEDVKKETKE AVEAVQDYAS EKKADFEEQI RQQLDALKQD IAQLESKVEA
MGQDAQEGME EQLAALKEQR QNLQAKLEQL QDAGNDTWQE LKKESSQAME DLKQSYEDLQ
SSTSEN
|
|---|
| |