7 homologs were found in PanDaTox collection
for query gene Tbd_1862 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_1862  hypothetical protein  100 
 
 
420 aa  843    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3165  hypothetical protein  25.75 
 
 
378 aa  98.6  2e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.399871  n/a   
 
 
-
 
NC_013889  TK90_0217  hypothetical protein  23.94 
 
 
400 aa  73.2  0.000000000008  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.714135  normal  0.0525826 
 
 
-
 
NC_008825  Mpe_A2943  fimbrial biogenesis protein  33.98 
 
 
434 aa  50.1  0.00008  Methylibium petroleiphilum PM1  Bacteria  normal  0.664137  normal  0.721905 
 
 
-
 
NC_007947  Mfla_0483  adhesin  31.25 
 
 
1998 aa  48.5  0.0002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0869  PilX protein  40 
 
 
177 aa  45.1  0.002  Marinobacter aquaeolei VT8  Bacteria  normal  0.255829  n/a   
 
 
-
 
NC_008786  Veis_2824  putative transmembrane protein  38.89 
 
 
221 aa  44.7  0.003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.766928  normal  0.597534 
 
 
-
 
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