6 homologs were found in PanDaTox collection
for query gene TM1040_R0027 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_R0027  tRNA-Met  100 
 
 		 76 bp  151  3e-35  Ruegeria sp. TM1040  Bacteria  normal  0.443225  normal  1 
 
 
-
 
NC_007802  Jann_R0015  tRNA-Met  100 
 
 		 77 bp  61.9  0.00000002  Jannaschia sp. CCS1  Bacteria  normal  0.325787  normal  0.15681 
 
 
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NC_009952  Dshi_6037  tRNA-Met  100 
 
 		 77 bp  61.9  0.00000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.018397  normal  0.113551 
 
 
-
 
NC_009484  Acry_R0050  tRNA-Met  90 
 
 		 76 bp  48.1  0.0003  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_60320  tRNA-Met  88.46 
 
 		 74 bp  48.1  0.0003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_R0042  tRNA-Met  85.19 
 
 		 73 bp  44.1  0.005  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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