8 homologs were found in PanDaTox collection
for query gene Swoo_4753 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_4753  beta-propeller repeat-containing protein  100 
 
 
601 aa  1248    Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.0000225473  unclonable  0.0000000282965 
 
 
-
 
NC_010506  Swoo_4752  hypothetical protein  78.67 
 
 
404 aa  632  1e-180  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.000000184435  hitchhiker  0.000000405781 
 
 
-
 
NC_010506  Swoo_1125  hypothetical protein  39.5 
 
 
445 aa  302  1e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3653  hypothetical protein  28.15 
 
 
361 aa  107  5e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  0.473976  normal  0.0378623 
 
 
-
 
NC_010506  Swoo_3679  hypothetical protein  26.41 
 
 
377 aa  90.1  1e-16  Shewanella woodyi ATCC 51908  Bacteria  decreased coverage  0.00591357  normal 
 
 
-
 
NC_014210  Ndas_1877  Beta-propeller repeat TECPR  32.65 
 
 
231 aa  89  2e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3182  hypothetical protein  23.33 
 
 
467 aa  52.4  0.00003  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4843  mannonate dehydratase  33.33 
 
 
925 aa  44.7  0.006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0781213  hitchhiker  0.00115783 
 
 
-
 
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