| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4843 |
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| Symbol | |
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| ID | 8361019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6049805 |
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| End bp | 6052582 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966993 |
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| Product | mannonate dehydratase |
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| Protein accession | YP_003124478 |
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| Protein GI | 256423825 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1312] D-mannonate dehydratase |
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| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0781213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00115783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATGG AACAAACAAT GCGTTGGTTT GGTCCCGGGG ATACCGTGCC CCTGCGATAT
ATCAGACAGG CCGGATGTAC CGGTGCCGTG ACAGCTTTAC ATCATATTAC GCCGGGTGAG
GTATGGCCGG CAGCGGCTAT TATGGAACGC CGTCAGCTGA TTGAAGCTGC AGGAATGACC
TGGACTGTGG TGGAAAGTTT ACCGGTGAGT GAAGATATTA AACGACAGTC GGGCGATTAT
CTCCGGCATA TAGAAAATTT CAAGGAAAGT CTGCGGAATC TGGCTGCGTG TGGTATAAAG
GTGATTACTT ACAATTTTAT GCCTGTACTG GATTGGGTGC GGACGCATAC GGACTATGCG
ATGGAAGACG GGAGTCGTGC CTTGTATTTT GAGCGTGCGG CATTTGTTGC TTTTGATCTG
TATCAATTAC AGCGCCCGGA TGCAGCGTTG GATTATGATG CGGTGACGAT CAAAAAGGCC
CGTCAGAGAT ATGAGGCCAT GTCCGTAGAA GAACGGGAAA GGATTTACAG GAGTGCTTTG
CTGGGATTAC CGGGATCGAA TGGACAATTT ACGGCGACGG AGGTGTTACA GGCATTGGAG
ACCTATAAAG ACATAGATGC AGATAAGTTA CGAACACACC TTTGTGATTT TTTGAGGGCG
GTTACACCTG TTGCTGAGGC ATCGGGTGTA CGGCTGGCAA TTCATCCGGA TGATCCGCCT
TATCCGGTAT TGGGTTTGCC CAGGGTGGTC AGTACAGAAG CGGATATACA GTATTTGTTT
GACACGGTAC CATCAGTCGC AAACGGCCTG TGTTTTTGCA CTGGTTCATT GGGCGCGAGA
GCAGATAATG ATTTGCCGGG TATGATACAG CGATGGGGCG ATCGTATCTG GTTCCTGCAT
CTGCGGAATA CCAAAAGAGA TGCGGAAGGC AATTTTTATG AAGCAGCTCA TCTTGCAGGC
GATGCAGATA TGTATGTGAT TGTAAGTGAA ATTGCGTTGC TGATGCAAAA GCGGAATGCA
TCGATTCCCA TGCGTCCTGA TCATGGGCAT CAGATGCTGG ATGATCAGGA CAAAACGACT
TATCCGGGAT ATAGTGCGAT CGGCAGACTA AAAGGGCTTG CTGAATTAAG GGGTCTGGAG
ACCGGCATAT TGCGCCATCT GTTCACGTTA TTGGTTCTAT TACTGACGGC TTTTTCTATG
CCAGTCTTCG CACAACAGAA TGCAGGTCAT CCGAGGCTAC AGCAACAGGG CAGCACGGTA
CAGCTGATGG TAAAGGGCGC TCCTTTTCTC ATACGCGGAG GAGAGCTGGG TAATTCAAGC
GCTTCCAGTA TCTCCTATAT GGAGGGGCTT TGGAATACCC TGGAACAAAT GCAGCTGAAT
ACCGTGCTGA CACCTGTTTA CTGGGAACTG ACGGAACCTG TGGAAGGGCA GTTTGATTTC
GCTGTAGTAG ACAGCATTAT TTATCAGGCG CGTAGTCATC ACATGCACCT GATCCTCTTG
TGGTTTGGTA CCTGGAAGAA CAGTATGAGT TGTTATGTTC CGTCCTGGGT GAAGAAAGAT
CCGCAGCGCT TCCCCAAGGC GCTAAAGAGC GATGGGAGCG GACAGGAGAT CTTATCGGCT
TTTAGTCCGC AGAACCTCGC AGCAGATGTA AAAGCATTCC GTGCGTTGAT GCAGCACATT
CACGAAACAG ATGCAGGTTA CAGTACCGTC ATTATGGTGC AGGTAGAGAA TGAAATCGGC
TTTCTGCCGG AGGCGAGAGA ACATACACCT GCTGCAGATG CAGCTTATAA AGGGTTAGTG
CCTGCTGCGC TGATGGATTA TCTGCAAAAA CATAAAAACG AGTTAGTCCC GGAACTGAAA
GCACATTGGT CGCGAAACGG CTATCTGACA AAGGGCAGCT GGGAGCAGGT ATTCGGGAAG
AGTGTGGCTA CCGAGGAACT TTTTCAGGCA TGGCATTATG CGCAATATAC CAATACGATA
GCCCGTGAAG GCAAGTCGGC ATATGCACTG CCGATGTTTG TCAATGCGGC GCTGAATCAC
CGGAATGTTG CACCCGGTCA GTATCCCAGC GGAGGCCCCT TACCCCATCT GATAGATATA
TGGCAGGCCG GAGCGCCGGC AATAGATATC TTATCCCCTG ATTTTTATAA TCCCCGGTTT
AAATATTACA ACGACCTTTA TGTGAGAAGG AACAATCCTC TGTTCATTCC GGAGATACGT
TTTGACGCAT CAGATGGGGC GAAGGCATTG TATGCGGTCG GACATTACCA GGCGATGGGT
TTCTCCCCGT TTTCAATAGA ATCTACCCTT CAACCAAAAG AAGAAACGAT CGCAAAGAGC
TACGCACTGT TGCAGCAATT ATGGCCGGTG ATTGCAAAGT GTCAGGGCTC GGGTAAGATG
GAAGGTGTTT TACTGGATAC AACAGATCTG CGTCAGGCGA TCGTTTCCGG TCAGTATCTC
CTTTCGGTGG CGCATGATGG TACACTGGGC TGGAAGGGTA TTCCCAAGGA GCAATGGCCG
GAGGGCGGTG GTATTATTAT CCGTACCGGA GAAGATGAAT TCATCATAGC AGGTACCGGT
ATTGTCATTA CATTTGGTAC CAGTGATAAA ATAGCGCCTG TGGTGGGTAT CCTGGAGGCA
ACAGAAGGTG TTTATACAGA TGGGAAATGG GTACCCGGCA GAAGGCTGAA TGGCGATCAG
ACCCACCAGG GGCGGCATAT CCGTATTCCT TTGGGAGAAT GGGGCATTCA ACGGATAAAG
CTATATCGTT ATCAATAA
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| Protein sequence | MQMEQTMRWF GPGDTVPLRY IRQAGCTGAV TALHHITPGE VWPAAAIMER RQLIEAAGMT
WTVVESLPVS EDIKRQSGDY LRHIENFKES LRNLAACGIK VITYNFMPVL DWVRTHTDYA
MEDGSRALYF ERAAFVAFDL YQLQRPDAAL DYDAVTIKKA RQRYEAMSVE ERERIYRSAL
LGLPGSNGQF TATEVLQALE TYKDIDADKL RTHLCDFLRA VTPVAEASGV RLAIHPDDPP
YPVLGLPRVV STEADIQYLF DTVPSVANGL CFCTGSLGAR ADNDLPGMIQ RWGDRIWFLH
LRNTKRDAEG NFYEAAHLAG DADMYVIVSE IALLMQKRNA SIPMRPDHGH QMLDDQDKTT
YPGYSAIGRL KGLAELRGLE TGILRHLFTL LVLLLTAFSM PVFAQQNAGH PRLQQQGSTV
QLMVKGAPFL IRGGELGNSS ASSISYMEGL WNTLEQMQLN TVLTPVYWEL TEPVEGQFDF
AVVDSIIYQA RSHHMHLILL WFGTWKNSMS CYVPSWVKKD PQRFPKALKS DGSGQEILSA
FSPQNLAADV KAFRALMQHI HETDAGYSTV IMVQVENEIG FLPEAREHTP AADAAYKGLV
PAALMDYLQK HKNELVPELK AHWSRNGYLT KGSWEQVFGK SVATEELFQA WHYAQYTNTI
AREGKSAYAL PMFVNAALNH RNVAPGQYPS GGPLPHLIDI WQAGAPAIDI LSPDFYNPRF
KYYNDLYVRR NNPLFIPEIR FDASDGAKAL YAVGHYQAMG FSPFSIESTL QPKEETIAKS
YALLQQLWPV IAKCQGSGKM EGVLLDTTDL RQAIVSGQYL LSVAHDGTLG WKGIPKEQWP
EGGGIIIRTG EDEFIIAGTG IVITFGTSDK IAPVVGILEA TEGVYTDGKW VPGRRLNGDQ
THQGRHIRIP LGEWGIQRIK LYRYQ
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