14 homologs were found in PanDaTox collection
for query gene Swol_1999 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_1999  hypothetical protein  100 
 
 
237 aa  492  9.999999999999999e-139  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_05240  hypothetical protein  52.65 
 
 
230 aa  254  7e-67  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.894138 
 
 
-
 
NC_002967  TDE2638  hypothetical protein  53.14 
 
 
208 aa  236  2e-61  Treponema denticola ATCC 35405  Bacteria  normal  0.642066  n/a   
 
 
-
 
NC_008609  Ppro_1930  SAM-dependent methyltransferases  41.13 
 
 
278 aa  177  1e-43  Pelobacter propionicus DSM 2379  Bacteria  normal  0.313552  n/a   
 
 
-
 
NC_009675  Anae109_4167  SAM-dependent methyltransferase  36.56 
 
 
279 aa  167  1e-40  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.30219  normal  0.258943 
 
 
-
 
NC_010831  Cphamn1_0259  Radical SAM domain protein  35.4 
 
 
1005 aa  153  2e-36  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.285156  normal 
 
 
-
 
NC_007498  Pcar_2089  putative methyltransferase  33.04 
 
 
1014 aa  146  4.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0627261  n/a   
 
 
-
 
NC_009051  Memar_0035  hypothetical protein  41.24 
 
 
223 aa  144  2e-33  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_0923  Methyltransferase type 11  32.31 
 
 
1039 aa  134  9e-31  Geobacter lovleyi SZ  Bacteria  normal  0.804895  n/a   
 
 
-
 
NC_010814  Glov_1985  Methyltransferase type 11  32.31 
 
 
1000 aa  129  5.0000000000000004e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1938  radical SAM domain-containing protein  30.84 
 
 
727 aa  124  1e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0228  Methyltransferase type 11  30.84 
 
 
1002 aa  120  1.9999999999999998e-26  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1619  hypothetical protein  33.17 
 
 
234 aa  119  3e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3260  SAM-dependent methyltransferase  26.89 
 
 
245 aa  85.9  5e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
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